RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 PIPP12273 146 aaPredicted RBP4.44□□□□□ -1.7
NCL-208ENST00000466274 PPIBP23284 216 aaKnown RBP4.44□□□□□ -1.7
NCL-208ENST00000466274 ALDH3A1P30838 453 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 PRDX2P32119 198 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 IFNA8P32881 189 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 PRRX1P54821 245 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 DLX6P56179 175 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 EDDM3BP56851 147 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 MEF2CQ06413 473 aaPredicted RBP4.44□□□□□ -1.7
NCL-208ENST00000466274 SCARB2Q14108 478 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 SNAI3Q3KNW1 292 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 FAM76BQ5HYJ3 339 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 C10orf25Q5T742 122 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 CCDC80Q76M96 950 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 OAFQ86UD1 273 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 ABHD12Q8N2K0 398 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 SMYD1Q8NB12 490 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 OR4P4Q8NGL7 312 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 TMEM255BQ8WV15 326 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 FLYWCH2Q96CP2 140 aaKnown RBP4.44□□□□□ -1.7
NCL-208ENST00000466274 PPP1R36Q96LQ0 422 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 ZNF570Q96NI8 536 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 FMO2Q99518 471 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 NRIP2Q9BQI9 281 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 CHCHD6Q9BRQ6 235 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 POLR2J2Q9GZM3 115 aaKnown RBP4.44□□□□□ -1.7
NCL-208ENST00000466274 POLR2J3Q9H1A7 115 aaKnown RBP4.44□□□□□ -1.7
NCL-208ENST00000466274 SYT4Q9H2B2 425 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 NMNAT1Q9HAN9 279 aaPredicted RBP4.44□□□□□ -1.7
NCL-208ENST00000466274 PLEKHA1Q9HB21 404 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 SCRT2Q9NQ03 307 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 CORO2BQ9UQ03 480 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 MRPS28Q9Y2Q9 187 aaKnown RBP4.44□□□□□ -1.7
NCL-208ENST00000466274 LHFPL6Q9Y693 200 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 WSB1Q9Y6I7 421 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 MUC4Q99102 2169 aa4.44□□□□□ -1.7
NCL-208ENST00000466274 DMBT1Q9UGM3 2413 aaPredicted RBP4.44□□□□□ -1.7
NCL-208ENST00000466274 XRCC3O43542 346 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 TPPPO94811 219 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 IGLV1-51P01701 117 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 CD14P08571 375 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 HOXB9P17482 250 aaPredicted RBP4.43□□□□□ -1.7
NCL-208ENST00000466274 PSMB8P28062 276 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 AQP1P29972 269 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 TAS2R41P59536 307 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 ZP1P60852 638 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 ZNF91Q05481 1191 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 TNFRSF9Q07011 255 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 TAF13Q15543 124 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 TPTE2P1Q5T6R2 138 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 ASPHD1Q5U4P2 390 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 OTPQ5XKR4 325 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 LCN12Q6JVE5 192 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 LINC00322Q6ZN03 302 aaPredicted RBP4.43□□□□□ -1.7
NCL-208ENST00000466274 GDPD3Q7L5L3 318 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 ADCK1Q86TW2 530 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 TIGD4Q8IY51 512 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 C4orf33Q8N1A6 199 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 LRRC75AQ8NAA5 344 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 OR51A7Q8NH64 312 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 TRMT10AQ8TBZ6 339 aaKnown RBP4.43□□□□□ -1.7
NCL-208ENST00000466274 SLC26A7Q8TE54 656 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 PHLDA1Q8WV24 401 aaPredicted RBP4.43□□□□□ -1.7
NCL-208ENST00000466274 RASSF5Q8WWW0 418 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 LZICQ8WZA0 190 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 TMEM106AQ96A25 262 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 SPSB4Q96A44 273 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 RPEQ96AT9 228 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 BPIFA2Q96DR5 249 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 RNF170Q96K19 258 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 FYTTD1Q96QD9 318 aaKnown RBP4.43□□□□□ -1.7
NCL-208ENST00000466274 PRSS27Q9BQR3 290 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 C20orf27Q9GZN8 174 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 NSRP1Q9H0G5 558 aaKnown RBP4.43□□□□□ -1.7
NCL-208ENST00000466274 TMEM38AQ9H6F2 299 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 AIG1Q9NVV5 245 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 N6AMT1Q9Y5N5 214 aa4.43□□□□□ -1.7
NCL-208ENST00000466274 A0A0J9YWU9 116 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 FAM90A18PA6NE21 464 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 FAM90A16PA6NEW6 464 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 FAM90A20PA6NIJ5 464 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 FAM183AA6NL82 134 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 FAM90A9PA6NNJ1 464 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 NCBP2LA6PVI3 153 aaKnown RBP4.42□□□□□ -1.7
NCL-208ENST00000466274 FAM90A12PA8MX19 464 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 FAM90A5PA8MXJ8 464 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 EVPLLA8MZ36 301 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 BUB1B-PAK6H3BSN5 160 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 K7N7A8 449 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 ITM2AO43736 263 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 HLA-DQA2P01906 255 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 IFNA4P05014 189 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 ALPLP05186 524 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 FAM90A15PP0C7V4 464 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 FAM90A13PP0C7W8 464 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 FAM90A14PP0C7W9 464 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 FAM90A24PP0C7X0 464 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 KITP10721 976 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 IFI30P13284 250 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 ANOS1P23352 680 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms