RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 DCTN5Q9BTE1 182 aa9.63□□□□□ -0.87
CUX1-207ENST00000465461 DNTTIP1Q9H147 329 aa9.63□□□□□ -0.87
CUX1-207ENST00000465461 HMG20AQ9NP66 347 aa9.63□□□□□ -0.87
CUX1-207ENST00000465461 TMEM138Q9NPI0 162 aa9.63□□□□□ -0.87
CUX1-207ENST00000465461 ONECUT1Q9UBC0 465 aa9.63□□□□□ -0.87
CUX1-207ENST00000465461 SETD2Q9BYW2 2564 aaPredicted RBP9.63□□□□□ -0.87
CUX1-207ENST00000465461 TMEM82A0PJX8 343 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 SIRPB1O00241 398 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 GPX5O75715 221 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 TK1P04183 234 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 ALDOBP05062 364 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 CPEP16870 476 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 ERVFRD-1P60508 538 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 SCN1BQ07699 218 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 MLLT11Q13015 90 aaPredicted RBP9.62□□□□□ -0.87
CUX1-207ENST00000465461 TPBGQ13641 420 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 TBCEQ15813 527 aaPredicted RBP9.62□□□□□ -0.87
CUX1-207ENST00000465461 SSX1Q16384 188 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 ARMCX4Q5H9R4 360 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 TMEM91Q6ZNR0 172 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 PHC2Q8IXK0 858 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 PDZD9Q8IXQ8 264 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 FAM185AQ8N0U4 392 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 BCL6BQ8N143 479 aaPredicted RBP9.62□□□□□ -0.87
CUX1-207ENST00000465461 ZNF561Q8N587 486 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 ASCC1Q8N9N2 400 aaKnown RBP9.62□□□□□ -0.87
CUX1-207ENST00000465461 LY6G5BQ8NDX9 201 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 NANPQ8TBE9 248 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 MUL1Q969V5 352 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 CHST6Q9GZX3 395 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 CNTD2Q9H8S5 307 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 C19orf12Q9NSK7 152 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 ZNF581Q9P0T4 197 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 CKLFQ9UBR5 152 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 FOXJ3Q9UPW0 622 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 SF3B6Q9Y3B4 125 aaKnown RBP9.62□□□□□ -0.87
CUX1-207ENST00000465461 SVEP1Q4LDE5 3571 aa9.62□□□□□ -0.87
CUX1-207ENST00000465461 TRAV40A0A0B4J280 105 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 A0A1W2PP11 408 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 A0A1W2PQ09 198 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 PSPNO60542 156 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 ZNF737O75373 536 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 TOX4O94842 621 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 HTR3BO95264 441 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 ECDO95905 644 aaPredicted RBP9.61□□□□□ -0.87
CUX1-207ENST00000465461 FSHBP01225 129 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 CHRM2P08172 466 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 FSTP19883 344 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 EPHA1P21709 976 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 PTGFRP43088 359 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 CAV3P56539 151 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 FABP5Q01469 135 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 GPR50Q13585 617 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 RUSC1-AS1Q66K80 236 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 C17orf107Q6ZR85 190 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 ZNF367Q7RTV3 350 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 Q8IYB0 196 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 SAXO1Q8IYX7 474 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 JAGN1Q8N5M9 183 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 MS4A15Q8N5U1 240 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 TPRX1Q8N7U7 411 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 PNLDC1Q8NA58 520 aaKnown RBP9.61□□□□□ -0.87
CUX1-207ENST00000465461 ZSCAN4Q8NAM6 433 aaPredicted RBP9.61□□□□□ -0.87
CUX1-207ENST00000465461 OR4S1Q8NGB4 309 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 WDFY2Q96P53 400 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 TBX15Q96SF7 602 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 YTHDF1Q9BYJ9 559 aaKnown RBP9.61□□□□□ -0.87
CUX1-207ENST00000465461 SIRPDQ9H106 197 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 OCEL1Q9H607 264 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 ISYNA1Q9NPH2 558 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 ING3Q9NXR8 418 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 ZNF69Q9UC07 566 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 LRRC42Q9Y546 428 aa9.61□□□□□ -0.87
CUX1-207ENST00000465461 ZFHX3Q15911 3703 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 K7N7A8 449 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 SC5DO75845 299 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 OR2H2O95918 312 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 MMP9P14780 707 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 ZNF44P15621 663 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 SERPINA2P20848 420 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 GABRR1P24046 479 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 EDDM3AQ14507 147 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 ZNF146Q15072 292 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 RSU1Q15404 277 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 PIGYQ3MUY2 71 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 METTL11BQ5VVY1 283 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 TMEM200BQ69YZ2 307 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 Q6P435 159 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 ASCL4Q6XD76 172 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 BRD3OSQ6XYD6 125 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 VMO1Q7Z5L0 202 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 LRRTM1Q86UE6 522 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 Q8N7P7 452 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 PXT1Q8NFP0 134 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 OR4D6Q8NGJ1 314 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 LHX4Q969G2 390 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 UPRTQ96BW1 309 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 SLC6A7Q99884 636 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 TCF7L1Q9HCS4 588 aa9.6□□□□□ -0.87
CUX1-207ENST00000465461 EXOSC4Q9NPD3 245 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms