RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 RBM11P57052 281 aaKnown RBP15.85■□□□□ 0.13
SYNE4-204ENST00000465425 SWI5Q1ZZU3 235 aa15.85■□□□□ 0.13
SYNE4-204ENST00000465425 CT55Q8WUE5 264 aa15.85■□□□□ 0.13
SYNE4-204ENST00000465425 NOSIPQ9Y314 301 aaKnown RBP15.85■□□□□ 0.13
SYNE4-204ENST00000465425 NSG2Q9Y328 171 aa15.85■□□□□ 0.13
SYNE4-204ENST00000465425 MRPS18CQ9Y3D5 142 aaKnown RBP15.85■□□□□ 0.13
SYNE4-204ENST00000465425 LOXL2Q9Y4K0 774 aa15.85■□□□□ 0.13
SYNE4-204ENST00000465425 MRPL33O75394 65 aaKnown RBP15.85■□□□□ 0.13
SYNE4-204ENST00000465425 F12P00748 615 aaPredicted RBP15.85■□□□□ 0.13
SYNE4-204ENST00000465425 MBPP02686 304 aaPredicted RBP15.85■□□□□ 0.13
SYNE4-204ENST00000465425 EDN3P14138 238 aa15.85■□□□□ 0.13
SYNE4-204ENST00000465425 MUC1P15941 1255 aaPredicted RBP15.85■□□□□ 0.13
SYNE4-204ENST00000465425 PVALBP20472 110 aaPredicted RBP15.85■□□□□ 0.13
SYNE4-204ENST00000465425 HERV-K104P61576 105 aa15.85■□□□□ 0.13
SYNE4-204ENST00000465425 ZNF611Q8N823 705 aa15.85■□□□□ 0.13
SYNE4-204ENST00000465425 NRIP2Q9BQI9 281 aa15.85■□□□□ 0.13
SYNE4-204ENST00000465425 P4HTMQ9NXG6 502 aa15.85■□□□□ 0.13
SYNE4-204ENST00000465425 BOKQ9UMX3 212 aaPredicted RBP15.85■□□□□ 0.13
SYNE4-204ENST00000465425 GLI4P10075 376 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 FUT3P21217 361 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 F2RL1P55085 397 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 GFRA1P56159 465 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 FLI1Q01543 452 aaPredicted RBP15.84■□□□□ 0.13
SYNE4-204ENST00000465425 LIAT1Q6ZQX7 453 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 LYZL2Q7Z4W2 148 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 CBLN2Q8IUK8 224 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 NDRG3Q9UGV2 375 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 AMDHD2Q9Y303 409 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 AGPAT2O15120 278 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 MMP7P09237 267 aaPredicted RBP15.84■□□□□ 0.13
SYNE4-204ENST00000465425 IL32P24001 234 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 SLC23A3Q6PIS1 610 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 SLC25A26Q70HW3 274 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 CALHM1Q8IU99 346 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 LGI3Q8N145 548 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 CCDC71LQ8N9Z2 235 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 MOB3AQ96BX8 217 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 C1QTNF5Q9BXJ0 243 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 PRDM14Q9GZV8 571 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 PARP11Q9NR21 331 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 ZFP57Q9NU63 452 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 LRFN1Q9P244 771 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 RCC2Q9P258 522 aaKnown RBP15.84■□□□□ 0.13
SYNE4-204ENST00000465425 FBXO9Q9UK97 447 aaPredicted RBP15.84■□□□□ 0.13
SYNE4-204ENST00000465425 STARD10Q9Y365 291 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 NCKAP5O14513 1909 aa15.84■□□□□ 0.13
SYNE4-204ENST00000465425 PINLYPA6NC86 204 aa15.83■□□□□ 0.12
SYNE4-204ENST00000465425 DIRAS3O95661 229 aa15.83■□□□□ 0.12
SYNE4-204ENST00000465425 CCNOP22674 350 aa15.83■□□□□ 0.12
SYNE4-204ENST00000465425 TMEM211Q6ICI0 200 aa15.83■□□□□ 0.12
SYNE4-204ENST00000465425 SPINK14Q6IE38 97 aa15.83■□□□□ 0.12
SYNE4-204ENST00000465425 Q6ZRG5 221 aa15.83■□□□□ 0.12
SYNE4-204ENST00000465425 LRTM2Q8N967 370 aa15.83■□□□□ 0.12
SYNE4-204ENST00000465425 UBAC2Q8NBM4 344 aa15.83■□□□□ 0.12
SYNE4-204ENST00000465425 PAPOLGQ9BWT3 736 aaKnown RBP15.83■□□□□ 0.12
SYNE4-204ENST00000465425 ZNF587BE7ETH6 402 aa15.83■□□□□ 0.12
SYNE4-204ENST00000465425 RNASEK-C17orf49H0YIS7 233 aa15.83■□□□□ 0.12
SYNE4-204ENST00000465425 PHF1O43189 567 aaPredicted RBP15.83■□□□□ 0.12
SYNE4-204ENST00000465425 DUSP1P28562 367 aa15.83■□□□□ 0.12
SYNE4-204ENST00000465425 SRYQ05066 204 aa15.83■□□□□ 0.12
SYNE4-204ENST00000465425 NRN1LQ496H8 165 aa15.83■□□□□ 0.12
SYNE4-204ENST00000465425 FBXW12Q6X9E4 464 aa15.83■□□□□ 0.12
SYNE4-204ENST00000465425 TIPARPQ7Z3E1 657 aaKnown RBP15.83■□□□□ 0.12
SYNE4-204ENST00000465425 BATF2Q8N1L9 274 aa15.83■□□□□ 0.12
SYNE4-204ENST00000465425 CPEB3Q8NE35 698 aaKnown RBP15.83■□□□□ 0.12
SYNE4-204ENST00000465425 SPSB4Q96A44 273 aa15.83■□□□□ 0.12
SYNE4-204ENST00000465425 TMEM45BQ96B21 275 aa15.83■□□□□ 0.12
SYNE4-204ENST00000465425 MLXQ9UH92 298 aa15.83■□□□□ 0.12
SYNE4-204ENST00000465425 SFTA3P0C7M3 94 aa15.82■□□□□ 0.12
SYNE4-204ENST00000465425 UCP3P55916 312 aa15.82■□□□□ 0.12
SYNE4-204ENST00000465425 FAM76BQ5HYJ3 339 aa15.82■□□□□ 0.12
SYNE4-204ENST00000465425 DHRS7BQ6IAN0 325 aaPredicted RBP15.82■□□□□ 0.12
SYNE4-204ENST00000465425 GLYATL2Q8WU03 294 aa15.82■□□□□ 0.12
SYNE4-204ENST00000465425 ERGIC1Q969X5 290 aa15.82■□□□□ 0.12
SYNE4-204ENST00000465425 THOC3Q96J01 351 aaKnown RBP15.82■□□□□ 0.12
SYNE4-204ENST00000465425 SMOC1Q9H4F8 434 aa15.82■□□□□ 0.12
SYNE4-204ENST00000465425 FAM212BQ9NTI7 297 aaPredicted RBP15.82■□□□□ 0.12
SYNE4-204ENST00000465425 BORCS7-ASMTA0A0B4J1R7 106 aa15.82■□□□□ 0.12
SYNE4-204ENST00000465425 ACP1P24666 158 aa15.82■□□□□ 0.12
SYNE4-204ENST00000465425 NPBWR1P48145 328 aa15.82■□□□□ 0.12
SYNE4-204ENST00000465425 FOXO1Q12778 655 aa15.82■□□□□ 0.12
SYNE4-204ENST00000465425 C9orf135Q5VTT2 229 aa15.82■□□□□ 0.12
SYNE4-204ENST00000465425 BTNL8Q6UX41 500 aa15.82■□□□□ 0.12
SYNE4-204ENST00000465425 OR11L1Q8NGX0 322 aa15.82■□□□□ 0.12
SYNE4-204ENST00000465425 C18orf12Q96KH6 178 aa15.82■□□□□ 0.12
SYNE4-204ENST00000465425 H7C1Q1 480 aa15.81■□□□□ 0.12
SYNE4-204ENST00000465425 LINC01387J3KSC0 135 aa15.81■□□□□ 0.12
SYNE4-204ENST00000465425 H2AFB1P0C5Y9 115 aa15.81■□□□□ 0.12
SYNE4-204ENST00000465425 AADACP22760 399 aa15.81■□□□□ 0.12
SYNE4-204ENST00000465425 CD80P33681 288 aa15.81■□□□□ 0.12
SYNE4-204ENST00000465425 NPBWR2P48146 333 aa15.81■□□□□ 0.12
SYNE4-204ENST00000465425 CLEC9AQ6UXN8 241 aa15.81■□□□□ 0.12
SYNE4-204ENST00000465425 MSI2Q96DH6 328 aaKnown RBP15.81■□□□□ 0.12
SYNE4-204ENST00000465425 PRDM6Q9NQX0 595 aa15.81■□□□□ 0.12
SYNE4-204ENST00000465425 PPYP01298 95 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 RFC3P40938 356 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 LPAL2Q16609 132 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 HFEQ30201 348 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 C1orf210Q8IVY1 113 aa15.8■□□□□ 0.12
SYNE4-204ENST00000465425 OR56B2PQ8NGI1 322 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms