RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ARL2BPQ9Y2Y0 163 aa3.15□□□□□ -1.91
PTCD3-205ENST00000464541 ZNF337Q9Y3M9 751 aa3.15□□□□□ -1.91
PTCD3-205ENST00000464541 PTPRTO14522 1441 aa3.15□□□□□ -1.91
PTCD3-205ENST00000464541 IGHV2OR16-5A0A0B4J2B6 119 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 SLC5A10A0PJK1 596 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 PGRMC1O00264 195 aaKnown RBP3.14□□□□□ -1.91
PTCD3-205ENST00000464541 CDIPTO14735 213 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 TCAPO15273 167 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 FGF16O43320 207 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 SYNGR1O43759 233 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 SHOX2O60902 331 aaPredicted RBP3.14□□□□□ -1.91
PTCD3-205ENST00000464541 UGT2B11O75310 529 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 DCTN3O75935 186 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 KRT75O95678 551 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 PTTG1O95997 202 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 CDK1P06493 297 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 ADRA2AP08913 450 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 GNAO1P09471 354 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 SLC35G6P0C7Q6 338 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 TCN2P20062 427 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 WARSP23381 471 aaKnown RBP3.14□□□□□ -1.91
PTCD3-205ENST00000464541 PSMB9P28065 219 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 KIR3DL2P43630 455 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 IDH3GP51553 393 aaPredicted RBP3.14□□□□□ -1.91
PTCD3-205ENST00000464541 AQP5P55064 265 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 RAB38P57729 211 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 LOXL1Q08397 574 aaPredicted RBP3.14□□□□□ -1.91
PTCD3-205ENST00000464541 CLEC12BQ2HXU8 276 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 CHRFAM7AQ494W8 412 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 KRTAP13-2Q52LG2 175 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 KPRPQ5T749 579 aaPredicted RBP3.14□□□□□ -1.91
PTCD3-205ENST00000464541 SYT6Q5T7P8 510 aaPredicted RBP3.14□□□□□ -1.91
PTCD3-205ENST00000464541 LRRN1Q6UXK5 716 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 NTM-AS1Q6ZSK4 140 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 USP50Q70EL3 339 aaPredicted RBP3.14□□□□□ -1.91
PTCD3-205ENST00000464541 RAB43Q86YS6 212 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 RIMKLAQ8IXN7 391 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 DAW1Q8N136 415 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 SPICQ8N5J4 248 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 METTL13Q8N6R0 699 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 OR2AE1Q8NHA4 323 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 OR5P2Q8WZ92 322 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 ZMYND19Q96E35 227 aaPredicted RBP3.14□□□□□ -1.91
PTCD3-205ENST00000464541 GPR22Q99680 433 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 SLC25A2Q9BXI2 301 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 OR51B6Q9H340 312 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 DNAJC27Q9NZQ0 273 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 UVRAGQ9P2Y5 699 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 RAB22AQ9UL26 194 aa3.14□□□□□ -1.91
PTCD3-205ENST00000464541 NCBP2LA6PVI3 153 aaKnown RBP3.13□□□□□ -1.91
PTCD3-205ENST00000464541 F5H768 121 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 J3QLI3 93 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 KCNK1O00180 336 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 STX10O60499 249 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 CD8AP01732 235 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 FABP1P07148 127 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 OR4E1P0C645 316 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 CD37P11049 281 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 ZNF14P17017 642 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-205ENST00000464541 PPICP45877 212 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 GNG10P50151 68 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 MXD1Q05195 221 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 AESQ08117 197 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 CDC20Q12834 499 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 PDK2Q15119 407 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 SLC25A35Q3KQZ1 300 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 TMEM176BQ3YBM2 270 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-205ENST00000464541 SPIN4Q56A73 249 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 SPIN3Q5JUX0 258 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 ANKRD22Q5VYY1 191 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 RTL4Q6ZR62 310 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 WDFY1Q8IWB7 410 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-205ENST00000464541 OR5AR1Q8NGP9 310 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 NT5CQ8TCD5 201 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 TESCQ96BS2 214 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 SEH1LQ96EE3 360 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 MRAP2Q96G30 205 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 BTN2A3PQ96KV6 586 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 CEP19Q96LK0 163 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 PACRGQ96M98 296 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-205ENST00000464541 TMEM56Q96MV1 263 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 C12orf10Q9HB07 376 aa3.13□□□□□ -1.91
PTCD3-205ENST00000464541 TRMT112Q9UI30 125 aaKnown RBP3.13□□□□□ -1.91
PTCD3-205ENST00000464541 ABCC11Q96J66 1382 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 ANKRD30AQ9BXX3 1397 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 ADGRL3Q9HAR2 1447 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.12□□□□□ -1.91
PTCD3-205ENST00000464541 TRAV8-4A0A0B4J246 113 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 DAPL1A0PJW8 107 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 EFCAB9A8MZ26 197 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 F5H5K5 113 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 H0YJX3 145 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 PHYHO14832 338 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 BIRC5O15392 142 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 RDH16O75452 317 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 OXTP01178 125 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 P01737 135 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 LINC00869P0C866 280 aa3.12□□□□□ -1.91
PTCD3-205ENST00000464541 PGA5P0DJD9 388 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms