RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 TRAM1Q15629 374 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 C1QL2Q7Z5L3 287 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 CEACAM19Q7Z692 300 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 PHC2Q8IXK0 858 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 TMEM185AQ8NFB2 350 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 PXT1Q8NFP0 134 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 NANPQ8TBE9 248 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 TNFAIP8L1Q8WVP5 186 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 H1FXQ92522 213 aaKnown RBP12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 TMEM203Q969S6 136 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 POM121Q96HA1 1249 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 DCTN5Q9BTE1 182 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 FAM192AQ9GZU8 254 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 CNTD2Q9H8S5 307 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 SEBOXQ9HB31 216 aaPredicted RBP12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 HMG20AQ9NP66 347 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 IL36RNQ9UBH0 155 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 GLS2Q9UI32 602 aa12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 RPUSD1Q9UJJ7 312 aaKnown RBP12.01□□□□□ -0.49
SQSTM1-205ENST00000464493 MAGEA13PA6NCF6 341 aa12□□□□□ -0.49
SQSTM1-205ENST00000464493 SC5DO75845 299 aa12□□□□□ -0.49
SQSTM1-205ENST00000464493 PPIAL4GP0DN37 164 aa12□□□□□ -0.49
SQSTM1-205ENST00000464493 PSMA1P25786 263 aaKnown RBP12□□□□□ -0.49
SQSTM1-205ENST00000464493 RPS25P62851 125 aaKnown RBP12□□□□□ -0.49
SQSTM1-205ENST00000464493 COL10A1Q03692 680 aa12□□□□□ -0.49
SQSTM1-205ENST00000464493 ARMCX4Q5H9R4 360 aa12□□□□□ -0.49
SQSTM1-205ENST00000464493 SPIN3Q5JUX0 258 aa12□□□□□ -0.49
SQSTM1-205ENST00000464493 ASCL4Q6XD76 172 aa12□□□□□ -0.49
SQSTM1-205ENST00000464493 LY6G5BQ8NDX9 201 aa12□□□□□ -0.49
SQSTM1-205ENST00000464493 NKX3-1Q99801 234 aaPredicted RBP12□□□□□ -0.49
SQSTM1-205ENST00000464493 FAM234AQ9H0X4 552 aa12□□□□□ -0.49
SQSTM1-205ENST00000464493 ELL3Q9HB65 397 aaPredicted RBP12□□□□□ -0.49
SQSTM1-205ENST00000464493 ING4Q9UNL4 249 aa12□□□□□ -0.49
SQSTM1-205ENST00000464493 GSTK1Q9Y2Q3 226 aa12□□□□□ -0.49
SQSTM1-205ENST00000464493 SF3B6Q9Y3B4 125 aaKnown RBP12□□□□□ -0.49
SQSTM1-205ENST00000464493 MEGF11A6BM72 1044 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 K7N7A8 449 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 HAND1O96004 215 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 TK1P04183 234 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 DUSP1P28562 367 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 GABRA5P31644 462 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 OR3A4PP47883 348 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 MTNR1BP49286 362 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 BMXP51813 675 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 GP2P55259 537 aaKnown RBP11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 SNU13P55769 128 aaKnown RBP11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 RSU1Q15404 277 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 KCTD21Q4G0X4 260 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 FAM27D1Q5T7N8 215 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 UBE2UQ5VVX9 321 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 ELP2Q6IA86 826 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 ZNF773Q6PK81 442 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 TMEM91Q6ZNR0 172 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 CDH26Q8IXH8 852 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 ASCC1Q8N9N2 400 aaKnown RBP11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 C8orf46Q8TAG6 207 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 DMRTB1Q96MA1 342 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 S100A13Q99584 98 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 PPIL3Q9H2H8 161 aaKnown RBP11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 TCF7L1Q9HCS4 588 aa11.99□□□□□ -0.49
SQSTM1-205ENST00000464493 SH2D1BO14796 132 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 ZNF737O75373 536 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 CDRT1O95170 752 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 IFNA2P01563 188 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 UCHL1P09936 223 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 SRMP19623 302 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 FGF12P61328 243 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 ARF6P62330 175 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 SSX1Q16384 188 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 HSD17B12Q53GQ0 312 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 METTL11BQ5VVY1 283 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 JAGN1Q8N5M9 183 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 NKAIN3Q8N8D7 197 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 PHYHIPQ92561 330 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 FCGR1BQ92637 280 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 UPRTQ96BW1 309 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 SNX22Q96L94 193 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 WDFY2Q96P53 400 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 METTL9Q9H1A3 318 aa11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 EXOSC4Q9NPD3 245 aaKnown RBP11.98□□□□□ -0.49
SQSTM1-205ENST00000464493 TRBV23-1A0A0A0MS06 115 aa11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 A0A1W2PQ09 198 aa11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 TMEM82A0PJX8 343 aa11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 RGS9O75916 674 aaPredicted RBP11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 TOX4O94842 621 aa11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 HTR3BO95264 441 aa11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 FSHBP01225 129 aa11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 FABP5Q01469 135 aa11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 SCGB2A2Q13296 93 aa11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 C17orf107Q6ZR85 190 aa11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 Q8NFD4 153 aa11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 OR5D13Q8NGL4 314 aa11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 OR10K1Q8NGX5 313 aa11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 MUL1Q969V5 352 aa11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 NR1H4Q96RI1 486 aaPredicted RBP11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 PCGF1Q9BSM1 259 aa11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 SLITRK2Q9H156 845 aa11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 PCDHB16Q9NRJ7 776 aa11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 IL36GQ9NZH8 169 aa11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 ONECUT1Q9UBC0 465 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms