RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 OR5H14A6NHG9 310 aa12.46□□□□□ -0.41
COL5A1-205ENST00000464187 DUS4LO95620 317 aaKnown RBP12.46□□□□□ -0.41
COL5A1-205ENST00000464187 ZNF14P17017 642 aaPredicted RBP12.46□□□□□ -0.41
COL5A1-205ENST00000464187 FPR2P25090 351 aa12.46□□□□□ -0.41
COL5A1-205ENST00000464187 CA7P43166 264 aa12.46□□□□□ -0.41
COL5A1-205ENST00000464187 TAS2R46P59540 309 aa12.46□□□□□ -0.41
COL5A1-205ENST00000464187 ARL6IP1Q15041 203 aa12.46□□□□□ -0.41
COL5A1-205ENST00000464187 PPA1Q15181 289 aa12.46□□□□□ -0.41
COL5A1-205ENST00000464187 NHLRC3Q5JS37 347 aa12.46□□□□□ -0.41
COL5A1-205ENST00000464187 NKAPLQ5M9Q1 402 aa12.46□□□□□ -0.41
COL5A1-205ENST00000464187 SIGIRRQ6IA17 410 aa12.46□□□□□ -0.41
COL5A1-205ENST00000464187 ASCL4Q6XD76 172 aa12.46□□□□□ -0.41
COL5A1-205ENST00000464187 MRGPRGQ86SM5 289 aa12.46□□□□□ -0.41
COL5A1-205ENST00000464187 PEG10Q86TG7 708 aaKnown RBP12.46□□□□□ -0.41
COL5A1-205ENST00000464187 SLC30A7Q8NEW0 376 aa12.46□□□□□ -0.41
COL5A1-205ENST00000464187 EMG1Q92979 244 aaKnown RBP12.46□□□□□ -0.41
COL5A1-205ENST00000464187 SPSB4Q96A44 273 aa12.46□□□□□ -0.41
COL5A1-205ENST00000464187 PDCD10Q9BUL8 212 aa12.46□□□□□ -0.41
COL5A1-205ENST00000464187 ZNF581Q9P0T4 197 aa12.46□□□□□ -0.41
COL5A1-205ENST00000464187 KALRNO60229 2985 aa12.46□□□□□ -0.41
COL5A1-205ENST00000464187 OR5H1A6NKK0 313 aa12.46□□□□□ -0.42
COL5A1-205ENST00000464187 SDCBPO00560 298 aaPredicted RBP12.46□□□□□ -0.42
COL5A1-205ENST00000464187 CELA3BP08861 270 aa12.46□□□□□ -0.42
COL5A1-205ENST00000464187 IL32P24001 234 aa12.46□□□□□ -0.42
COL5A1-205ENST00000464187 IDH3GP51553 393 aaPredicted RBP12.46□□□□□ -0.42
COL5A1-205ENST00000464187 FGL1Q08830 312 aa12.46□□□□□ -0.42
COL5A1-205ENST00000464187 AADACL3Q5VUY0 350 aa12.46□□□□□ -0.42
COL5A1-205ENST00000464187 TMEM211Q6ICI0 200 aa12.46□□□□□ -0.42
COL5A1-205ENST00000464187 MYPOPQ86VE0 399 aaPredicted RBP12.46□□□□□ -0.42
COL5A1-205ENST00000464187 TMEM185AQ8NFB2 350 aa12.46□□□□□ -0.42
COL5A1-205ENST00000464187 CNTNAP3BQ96NU0 1288 aa12.46□□□□□ -0.42
COL5A1-205ENST00000464187 HDHD3Q9BSH5 251 aaPredicted RBP12.46□□□□□ -0.42
COL5A1-205ENST00000464187 CNTNAP3Q9BZ76 1288 aa12.46□□□□□ -0.42
COL5A1-205ENST00000464187 MFFQ9GZY8 342 aa12.46□□□□□ -0.42
COL5A1-205ENST00000464187 PLEKHJ1Q9NW61 149 aa12.46□□□□□ -0.42
COL5A1-205ENST00000464187 EHFQ9NZC4 300 aa12.46□□□□□ -0.42
COL5A1-205ENST00000464187 SHANK1Q9Y566 2161 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 IGKV1D-8A0A087WSZ0 117 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 IGKV1-12A0A0C4DH73 117 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 ZNF816-ZNF321PA0A0X1KG74 233 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 TUBAL3A6NHL2 446 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 DBX1A6NMT0 343 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 B3GALNT1O75752 331 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 AGFG2O95081 481 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 IGKV1D-12P01611 117 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 IGKV3-15P01624 115 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 CSTBP04080 98 aaKnown RBP12.45□□□□□ -0.42
COL5A1-205ENST00000464187 TMEM128Q5BJH2 165 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 PLCXD3Q63HM9 321 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 THOC7Q6I9Y2 204 aaKnown RBP12.45□□□□□ -0.42
COL5A1-205ENST00000464187 GSG1LQ6UXU4 331 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 MOB3CQ70IA8 216 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 KCTD9Q7L273 389 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 TMEM17Q86X19 198 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 RELL2Q8NC24 303 aaPredicted RBP12.45□□□□□ -0.42
COL5A1-205ENST00000464187 OR5AP2Q8NGF4 316 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 SEC22AQ96IW7 307 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 C1QTNF6Q9BXI9 259 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 GSX2Q9BZM3 304 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 PPA2Q9H2U2 334 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 OBP2BQ9NPH6 170 aa12.45□□□□□ -0.42
COL5A1-205ENST00000464187 ZNF701Q9NV72 531 aaPredicted RBP12.45□□□□□ -0.42
COL5A1-205ENST00000464187 SLC25A4P12235 298 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 CBR1P16152 277 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 FUT6P51993 359 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 ATP1B3P54709 279 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 RAB14P61106 215 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 FAM27E3Q08E93 113 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 BAMBIQ13145 260 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 TAF9Q16594 264 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 TBC1D28Q2M2D7 210 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 TMEM65Q6PI78 240 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 OVCH2Q7RTZ1 564 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 ZNF546Q86UE3 836 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 COMMD7Q86VX2 200 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 PPP1R1CQ8WVI7 109 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 PIGCQ92535 297 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 APOBEC3DQ96AK3 386 aaPredicted RBP12.44□□□□□ -0.42
COL5A1-205ENST00000464187 S100PBPQ96BU1 408 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 RTBDNQ9BSG5 229 aaPredicted RBP12.44□□□□□ -0.42
COL5A1-205ENST00000464187 SLC7A11Q9UPY5 501 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 FAM25EA8MYX2 175 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 NGFP01138 241 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 PI3P19957 117 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 CHATP28329 748 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 WNT5AP41221 380 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 MRPL49Q13405 166 aaKnown RBP12.44□□□□□ -0.42
COL5A1-205ENST00000464187 CHRFAM7AQ494W8 412 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 LRRC37A5PQ49AS3 106 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 TIMM23BQ5SRD1 257 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 C11orf87Q6NUJ2 197 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 FAAP24Q9BTP7 215 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 IL36GQ9NZH8 169 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 COMMD9Q9P000 198 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 JKAMPQ9P055 326 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 AK3Q9UIJ7 227 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 HSF4Q9ULV5 492 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 TNFSF18Q9UNG2 199 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 AMDHD2Q9Y303 409 aa12.44□□□□□ -0.42
COL5A1-205ENST00000464187 SLC25A15Q9Y619 301 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms