RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 PSMD7P51665 324 aa16.44■□□□□ 0.22
COL9A3-204ENST00000463487 FGF12P61328 243 aa16.44■□□□□ 0.22
COL9A3-204ENST00000463487 ZNF146Q15072 292 aa16.44■□□□□ 0.22
COL9A3-204ENST00000463487 FAM120AOSQ5T036 256 aa16.44■□□□□ 0.22
COL9A3-204ENST00000463487 ELP2Q6IA86 826 aa16.44■□□□□ 0.22
COL9A3-204ENST00000463487 TMEM91Q6ZNR0 172 aa16.44■□□□□ 0.22
COL9A3-204ENST00000463487 BTN2A1Q7KYR7 527 aa16.44■□□□□ 0.22
COL9A3-204ENST00000463487 ASCC1Q8N9N2 400 aaKnown RBP16.44■□□□□ 0.22
COL9A3-204ENST00000463487 PPP1R35Q8TAP8 253 aa16.44■□□□□ 0.22
COL9A3-204ENST00000463487 H1FXQ92522 213 aaKnown RBP16.44■□□□□ 0.22
COL9A3-204ENST00000463487 DMRTB1Q96MA1 342 aa16.44■□□□□ 0.22
COL9A3-204ENST00000463487 BEX2Q9BXY8 128 aa16.44■□□□□ 0.22
COL9A3-204ENST00000463487 EXOSC4Q9NPD3 245 aaKnown RBP16.44■□□□□ 0.22
COL9A3-204ENST00000463487 GSTK1Q9Y2Q3 226 aa16.44■□□□□ 0.22
COL9A3-204ENST00000463487 MRPS28Q9Y2Q9 187 aaKnown RBP16.44■□□□□ 0.22
COL9A3-204ENST00000463487 INSIG2Q9Y5U4 225 aa16.44■□□□□ 0.22
COL9A3-204ENST00000463487 TRDV1A0A1B0GX56 115 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 MAGEA13PA6NCF6 341 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 F8VVB4 439 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 F8VWA3 439 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 SFTPBP07988 381 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 AMY2BP19961 511 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 SCGB2A2Q13296 93 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 DGUOKQ16854 277 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 CHRFAM7AQ494W8 412 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 AWAT2Q6E213 333 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 CRIP3Q6Q6R5 217 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 CD200R1LQ6Q8B3 271 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 ASCL4Q6XD76 172 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 RNF144BQ7Z419 303 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 CD177Q8N6Q3 437 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 ZNRF1Q8ND25 227 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 OR5D13Q8NGL4 314 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 C7orf69Q9H7B7 122 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 CNTD2Q9H8S5 307 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 GHRLQ9UBU3 117 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 STUB1Q9UNE7 303 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 SSR3Q9UNL2 185 aa16.43■□□□□ 0.22
COL9A3-204ENST00000463487 ZANQ9Y493 2812 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 TRBV23-1A0A0A0MS06 115 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 KIR2DS1A0A191URI9 304 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 A0A1B0GW55 424 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 A0A1W2PPH5 198 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 PDCD5O14737 125 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 CDRT1O95170 752 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 HTR3BO95264 441 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 UBBP0CG47 229 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 DUX4L2P0CJ85 424 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 DUX4L3P0CJ86 424 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 DUX4L4P0CJ87 422 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 DUX4L5P0CJ88 424 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 DUX4L6P0CJ89 424 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 DUX4L7P0CJ90 424 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 CEBPDP49716 269 aaPredicted RBP16.42■□□□□ 0.22
COL9A3-204ENST00000463487 SNU13P55769 128 aaKnown RBP16.42■□□□□ 0.22
COL9A3-204ENST00000463487 COL10A1Q03692 680 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 DUX4L9Q6RFH8 374 aaPredicted RBP16.42■□□□□ 0.22
COL9A3-204ENST00000463487 CHST4Q8NCG5 386 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 TBC1D15Q8TC07 691 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 MUL1Q969V5 352 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 MMP26Q9NRE1 261 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 DUX4Q9UBX2 424 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 RPUSD1Q9UJJ7 312 aaKnown RBP16.42■□□□□ 0.22
COL9A3-204ENST00000463487 MAB21L2Q9Y586 359 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 AUP1Q9Y679 476 aa16.42■□□□□ 0.22
COL9A3-204ENST00000463487 TK1P04183 234 aa16.41■□□□□ 0.22
COL9A3-204ENST00000463487 GTF2F2P13984 249 aa16.41■□□□□ 0.22
COL9A3-204ENST00000463487 SELLP14151 372 aa16.41■□□□□ 0.22
COL9A3-204ENST00000463487 ZNF44P15621 663 aa16.41■□□□□ 0.22
COL9A3-204ENST00000463487 SERPINA2P20848 420 aa16.41■□□□□ 0.22
COL9A3-204ENST00000463487 GABRR1P24046 479 aa16.41■□□□□ 0.22
COL9A3-204ENST00000463487 SRP14P37108 136 aaKnown RBP16.41■□□□□ 0.22
COL9A3-204ENST00000463487 TIMM50Q3ZCQ8 353 aa16.41■□□□□ 0.22
COL9A3-204ENST00000463487 SLC22A6Q4U2R8 563 aa16.41■□□□□ 0.22
COL9A3-204ENST00000463487 GDPD3Q7L5L3 318 aa16.41■□□□□ 0.22
COL9A3-204ENST00000463487 LRRTM1Q86UE6 522 aa16.41■□□□□ 0.22
COL9A3-204ENST00000463487 CMTM4Q8IZR5 234 aa16.41■□□□□ 0.22
COL9A3-204ENST00000463487 OSR2Q8N2R0 312 aa16.41■□□□□ 0.22
COL9A3-204ENST00000463487 MRPS24Q96EL2 167 aaKnown RBP16.41■□□□□ 0.22
COL9A3-204ENST00000463487 SNX22Q96L94 193 aa16.41■□□□□ 0.22
COL9A3-204ENST00000463487 TEP1Q99973 2627 aaKnown RBP16.4■□□□□ 0.22
COL9A3-204ENST00000463487 A0A1W2PQ09 198 aa16.4■□□□□ 0.22
COL9A3-204ENST00000463487 C22orf46C9J442 243 aa16.4■□□□□ 0.22
COL9A3-204ENST00000463487 K7N7A8 449 aa16.4■□□□□ 0.22
COL9A3-204ENST00000463487 CRLF1O75462 422 aa16.4■□□□□ 0.22
COL9A3-204ENST00000463487 TFF1P04155 84 aa16.4■□□□□ 0.22
COL9A3-204ENST00000463487 CALCBP10092 127 aa16.4■□□□□ 0.22
COL9A3-204ENST00000463487 DUSP1P28562 367 aa16.4■□□□□ 0.22
COL9A3-204ENST00000463487 GP2P55259 537 aaKnown RBP16.4■□□□□ 0.22
COL9A3-204ENST00000463487 PAX2Q02962 417 aa16.4■□□□□ 0.22
COL9A3-204ENST00000463487 IL13RA2Q14627 380 aa16.4■□□□□ 0.22
COL9A3-204ENST00000463487 GLIPR1L1Q6UWM5 242 aa16.4■□□□□ 0.22
COL9A3-204ENST00000463487 C1QL2Q7Z5L3 287 aa16.4■□□□□ 0.22
COL9A3-204ENST00000463487 LINC00596Q86U02 117 aa16.4■□□□□ 0.22
COL9A3-204ENST00000463487 OR8H2Q8N162 312 aa16.4■□□□□ 0.22
COL9A3-204ENST00000463487 Q8NFD4 153 aa16.4■□□□□ 0.22
COL9A3-204ENST00000463487 OR51T1Q8NGJ9 327 aa16.4■□□□□ 0.22
COL9A3-204ENST00000463487 OR6M1Q8NGM8 313 aa16.4■□□□□ 0.22
COL9A3-204ENST00000463487 OR10K1Q8NGX5 313 aa16.4■□□□□ 0.22
COL9A3-204ENST00000463487 DCTN5Q9BTE1 182 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms