RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 OR2T7P0C7T2 308 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 PF4V1P10720 104 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 HTR1DP28221 377 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 BRS3P32247 399 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 RBP2P50120 134 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 CATSPERDQ86XM0 798 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 ZDHHC13Q8IUH4 622 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 OR10H4Q8NGA5 316 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 PP6455Q8WZ26 134 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 STMN2Q93045 179 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 C10orf35Q96D05 121 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 CHST5Q9GZS9 411 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 WNT10AQ9GZT5 417 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 TMEM133Q9H2Q1 129 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 PCDHGB5Q9Y5G0 923 aa12.39□□□□□ -0.43
SKA3-204ENST00000462482 PRKDCP78527 4128 aaKnown RBP12.38□□□□□ -0.43
SKA3-204ENST00000462482 TMEM82A0PJX8 343 aa12.38□□□□□ -0.43
SKA3-204ENST00000462482 ZAR1LA6NP61 321 aa12.38□□□□□ -0.43
SKA3-204ENST00000462482 MGST3O14880 152 aa12.38□□□□□ -0.43
SKA3-204ENST00000462482 SULT1C4O75897 302 aa12.38□□□□□ -0.43
SKA3-204ENST00000462482 UBCP0CG48 685 aaKnown RBP12.38□□□□□ -0.43
SKA3-204ENST00000462482 POU3F4P49335 361 aa12.38□□□□□ -0.43
SKA3-204ENST00000462482 BLCAPP62952 87 aa12.38□□□□□ -0.43
SKA3-204ENST00000462482 UBE2V2Q15819 145 aa12.38□□□□□ -0.43
SKA3-204ENST00000462482 C12orf73Q69YU5 71 aa12.38□□□□□ -0.43
SKA3-204ENST00000462482 OR52W1Q6IF63 320 aa12.38□□□□□ -0.43
SKA3-204ENST00000462482 C16orf82Q7Z2V1 217 aa12.38□□□□□ -0.43
SKA3-204ENST00000462482 CENPVQ7Z7K6 275 aaPredicted RBP12.38□□□□□ -0.43
SKA3-204ENST00000462482 FAM58AQ8N1B3 248 aa12.38□□□□□ -0.43
SKA3-204ENST00000462482 OR5AU1Q8NGC0 362 aa12.38□□□□□ -0.43
SKA3-204ENST00000462482 CHST6Q9GZX3 395 aa12.38□□□□□ -0.43
SKA3-204ENST00000462482 GAL3ST2Q9H3Q3 398 aa12.38□□□□□ -0.43
SKA3-204ENST00000462482 SEBOXQ9HB31 216 aaPredicted RBP12.38□□□□□ -0.43
SKA3-204ENST00000462482 TRGV10A0A0A0MS01 117 aa12.37□□□□□ -0.43
SKA3-204ENST00000462482 A0A1W2PQL4 384 aaPredicted RBP12.37□□□□□ -0.43
SKA3-204ENST00000462482 A0A1W2PRX2 142 aa12.37□□□□□ -0.43
SKA3-204ENST00000462482 F8VVB4 439 aa12.37□□□□□ -0.43
SKA3-204ENST00000462482 F8VWA3 439 aa12.37□□□□□ -0.43
SKA3-204ENST00000462482 MITFO75030 526 aaPredicted RBP12.37□□□□□ -0.43
SKA3-204ENST00000462482 PF4P02776 101 aa12.37□□□□□ -0.43
SKA3-204ENST00000462482 ZNF20P17024 532 aa12.37□□□□□ -0.43
SKA3-204ENST00000462482 PRKACBP22694 351 aa12.37□□□□□ -0.43
SKA3-204ENST00000462482 SPIN3Q5JUX0 258 aa12.37□□□□□ -0.43
SKA3-204ENST00000462482 RTN4RL2Q86UN3 420 aa12.37□□□□□ -0.43
SKA3-204ENST00000462482 TPRX1Q8N7U7 411 aa12.37□□□□□ -0.43
SKA3-204ENST00000462482 DNAAF1Q8NEP3 725 aa12.37□□□□□ -0.43
SKA3-204ENST00000462482 ZNF596Q8TC21 504 aa12.37□□□□□ -0.43
SKA3-204ENST00000462482 RFKQ969G6 155 aa12.37□□□□□ -0.43
SKA3-204ENST00000462482 UTP4Q969X6 686 aaKnown RBP12.37□□□□□ -0.43
SKA3-204ENST00000462482 PHF21AQ96BD5 680 aa12.37□□□□□ -0.43
SKA3-204ENST00000462482 NEK6Q9HC98 313 aa12.37□□□□□ -0.43
SKA3-204ENST00000462482 DPM3Q9P2X0 92 aa12.37□□□□□ -0.43
SKA3-204ENST00000462482 UBE2J1Q9Y385 318 aaPredicted RBP12.37□□□□□ -0.43
SKA3-204ENST00000462482 IGKV1-27A0A075B6S5 117 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 TRBV2A0A0J9YWF9 115 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 LOC107986453A0A1B0GWG9 222 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 SH2D1BO14796 132 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 CLIC3O95833 236 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 PRKACAP17612 351 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 FASP25445 335 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 ERP29P30040 261 aaKnown RBP12.36□□□□□ -0.43
SKA3-204ENST00000462482 HTR1FP30939 366 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 CEACAM3P40198 252 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 SNU13P55769 128 aaKnown RBP12.36□□□□□ -0.43
SKA3-204ENST00000462482 MTCP1P56278 107 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 P2RX3P56373 397 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 CDC42P60953 191 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 EFNB1P98172 346 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 ZNF91Q05481 1191 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 ATP6AP1Q15904 470 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 LDLRAD2Q5SZI1 272 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 TMEM244Q5VVB8 128 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 SSX6Q7RTT6 188 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 ABHD12Q8N2K0 398 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 OR4X2Q8NGF9 303 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 CREB3L1Q96BA8 519 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 LIN7BQ9HAP6 207 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 AURKAIP1Q9NWT8 199 aaPredicted RBP12.36□□□□□ -0.43
SKA3-204ENST00000462482 GNG8Q9UK08 70 aa12.36□□□□□ -0.43
SKA3-204ENST00000462482 TCRBV4S1A1TA0A5B7 111 aa12.35□□□□□ -0.43
SKA3-204ENST00000462482 FAM90A22PA8MWA6 464 aa12.35□□□□□ -0.43
SKA3-204ENST00000462482 LEUTXA8MZ59 168 aa12.35□□□□□ -0.43
SKA3-204ENST00000462482 TOR1AO14656 332 aa12.35□□□□□ -0.43
SKA3-204ENST00000462482 IGHA1P01876 353 aa12.35□□□□□ -0.43
SKA3-204ENST00000462482 DUSP1P28562 367 aa12.35□□□□□ -0.43
SKA3-204ENST00000462482 TMED1Q13445 227 aa12.35□□□□□ -0.43
SKA3-204ENST00000462482 KPNB1Q14974 876 aaKnown RBP12.35□□□□□ -0.43
SKA3-204ENST00000462482 TMEM95Q3KNT9 176 aa12.35□□□□□ -0.43
SKA3-204ENST00000462482 KDM4DQ6B0I6 523 aa12.35□□□□□ -0.43
SKA3-204ENST00000462482 LHFPL2Q6ZUX7 228 aa12.35□□□□□ -0.43
SKA3-204ENST00000462482 OR52N4Q8NGI2 321 aa12.35□□□□□ -0.43
SKA3-204ENST00000462482 OR8J1Q8NGP2 316 aa12.35□□□□□ -0.43
SKA3-204ENST00000462482 WIPF2Q8TF74 440 aaPredicted RBP12.35□□□□□ -0.43
SKA3-204ENST00000462482 OCSTAMPQ9BR26 566 aa12.35□□□□□ -0.43
SKA3-204ENST00000462482 EXOSC4Q9NPD3 245 aaKnown RBP12.35□□□□□ -0.43
SKA3-204ENST00000462482 RBFOX1Q9NWB1 397 aaKnown RBP12.35□□□□□ -0.43
SKA3-204ENST00000462482 TSSC4Q9Y5U2 329 aaPredicted RBP12.35□□□□□ -0.43
SKA3-204ENST00000462482 ADARB2-AS1A8MUL3 147 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 SIRPB1O00241 398 aa12.34□□□□□ -0.43
SKA3-204ENST00000462482 PSPNO60542 156 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms