RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 SCAF4O95104 1147 aaKnown RBP4.75□□□□□ -1.65
VPS36-202ENST00000462289 CYB5R3P00387 301 aaPredicted RBP4.75□□□□□ -1.65
VPS36-202ENST00000462289 IGKV1D-12P01611 117 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 UCHL1P09936 223 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 PRKACBP22694 351 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 GATA3P23771 443 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 GNALP38405 381 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 GPM6AP51674 278 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 PTTG1IPP53801 180 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 CAV3P56539 151 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 HOXA4Q00056 320 aaPredicted RBP4.75□□□□□ -1.65
VPS36-202ENST00000462289 GFOD2Q3B7J2 385 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 NHLRC3Q5JS37 347 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 CEP78Q5JTW2 689 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 FAM201AQ5SY85 155 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 SYT6Q5T7P8 510 aaPredicted RBP4.75□□□□□ -1.65
VPS36-202ENST00000462289 FAM166AQ6J272 317 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 ZNF773Q6PK81 442 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 ACP7Q6ZNF0 438 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 TMEM91Q6ZNR0 172 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 ZNF367Q7RTV3 350 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 RNF144BQ7Z419 303 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 SERPINA12Q8IW75 414 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 PHC2Q8IXK0 858 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 SPARTQ8N0X7 666 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 STX19Q8N4C7 294 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 SPICQ8N5J4 248 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 MS4A15Q8N5U1 240 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 ZNF676Q8N7Q3 588 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 LY6G5BQ8NDX9 201 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 PXT1Q8NFP0 134 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 OR51A2Q8NGJ7 313 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 OR51T1Q8NGJ9 327 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 OR5D14Q8NGL3 314 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 OR8S1Q8NH09 359 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 PIGCQ92535 297 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 RPL3LQ92901 407 aaKnown RBP4.75□□□□□ -1.65
VPS36-202ENST00000462289 TMEM106AQ96A25 262 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 FGGYQ96C11 551 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 RAB39BQ96DA2 213 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 TIMD4Q96H15 378 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 RNF170Q96K19 258 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 CNBD2Q96M20 576 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 SMR3AQ99954 134 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 COMMD4Q9H0A8 199 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 WDR13Q9H1Z4 485 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 PPIL3Q9H2H8 161 aaKnown RBP4.75□□□□□ -1.65
VPS36-202ENST00000462289 Q9H521 79 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 UNKLQ9H9P5 680 aaKnown RBP4.75□□□□□ -1.65
VPS36-202ENST00000462289 C1orf123Q9NWV4 160 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 NDUFB11Q9NX14 153 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 MTCH1Q9NZJ7 389 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 DKK2Q9UBU2 259 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 MIOXQ9UGB7 285 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 FOXJ3Q9UPW0 622 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 LRCH1Q9Y2L9 728 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 PPIAL4AQ9Y536 164 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 TRAV8-7A0A075B6U6 113 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 TRAV38-1A0A0B4J264 116 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 MAGEA13PA6NCF6 341 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 ZNF879B4DU55 563 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 F8VVB4 439 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 F8VWA3 439 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 MYL12BO14950 172 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 SIGLEC5O15389 551 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 SYNGR1O43759 233 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 MSMBP08118 114 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 PSG2P11465 335 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 ADRA2CP18825 462 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 CELP19835 753 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 AZGP1P25311 298 aaKnown RBP4.74□□□□□ -1.65
VPS36-202ENST00000462289 PSMA1P25786 263 aaKnown RBP4.74□□□□□ -1.65
VPS36-202ENST00000462289 LMO1P25800 156 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 FGF9P31371 208 aaPredicted RBP4.74□□□□□ -1.65
VPS36-202ENST00000462289 GABRA5P31644 462 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 HAAOP46952 286 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 RBP2P50120 134 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 NPY4RP50391 375 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 PAX8Q06710 450 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 PDZK1IP1Q13113 114 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 CNN3Q15417 329 aaKnown RBP4.74□□□□□ -1.65
VPS36-202ENST00000462289 TRAM1Q15629 374 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 KCNJ8Q15842 424 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 C1orf100Q5SVJ3 147 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 PLCXD3Q63HM9 321 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 WDR25Q64LD2 544 aaPredicted RBP4.74□□□□□ -1.65
VPS36-202ENST00000462289 LYPD2Q6UXB3 125 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 Q6YL49 198 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 LHFPL2Q6ZUX7 228 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 LRRTM1Q86UE6 522 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 Q8IYB0 196 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 MAPK1IP1LQ8NDC0 245 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 DEFB108BQ8NET1 73 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 OR13C3Q8NGS6 347 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 OR13C5Q8NGS8 318 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 OR11L1Q8NGX0 322 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 ZNF671Q8TAW3 534 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 LRRC29Q8WV35 223 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 FCGR1BQ92637 280 aa4.74□□□□□ -1.65
VPS36-202ENST00000462289 GAFA1Q96PS6 74 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms