RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 OR12D2P58182 307 aa7.42□□□□□ -1.22
BRCA1-207ENST00000461798 NANOS3P60323 173 aaKnown RBP7.42□□□□□ -1.22
BRCA1-207ENST00000461798 GDPD3Q7L5L3 318 aa7.42□□□□□ -1.22
BRCA1-207ENST00000461798 ACBD7Q8N6N7 88 aa7.42□□□□□ -1.22
BRCA1-207ENST00000461798 OR13D1Q8NGV5 346 aa7.42□□□□□ -1.22
BRCA1-207ENST00000461798 PPP1R35Q8TAP8 253 aa7.42□□□□□ -1.22
BRCA1-207ENST00000461798 SLAMF9Q96A28 289 aa7.42□□□□□ -1.22
BRCA1-207ENST00000461798 SPSB1Q96BD6 273 aa7.42□□□□□ -1.22
BRCA1-207ENST00000461798 MALSU1Q96EH3 234 aa7.42□□□□□ -1.22
BRCA1-207ENST00000461798 ADAT3Q96EY9 351 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-207ENST00000461798 MYCBPQ99417 103 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-207ENST00000461798 ORC6Q9Y5N6 252 aa7.42□□□□□ -1.22
BRCA1-207ENST00000461798 TRBV2A0A0J9YWF9 115 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 hADV38S2A0JD32 116 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 DAPL1A0PJW8 107 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 H3BSH0 61 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 HAND1O96004 215 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 CYB5AP00167 134 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 IGHV1-8P0DP01 117 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 PIPP12273 146 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-207ENST00000461798 COX7A1P24310 79 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 AZGP1P25311 298 aaKnown RBP7.41□□□□□ -1.22
BRCA1-207ENST00000461798 LMO1P25800 156 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 PEX2P28328 305 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 NPBWR2P48146 333 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 DYNLT3P51808 116 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 BMXP51813 675 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 MTCP1P56278 107 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 DEFA6Q01524 100 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 ZNF91Q05481 1191 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 PDZK1IP1Q13113 114 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 KPNB1Q14974 876 aaKnown RBP7.41□□□□□ -1.22
BRCA1-207ENST00000461798 SPIN3Q5JUX0 258 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 ZNF626Q68DY1 528 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 LHFPL2Q6ZUX7 228 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 TCF23Q7RTU1 214 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 FAM58AQ8N1B3 248 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 BATF2Q8N1L9 274 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 SYS1Q8N2H4 156 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 CBR4Q8N4T8 237 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 ASCC1Q8N9N2 400 aaKnown RBP7.41□□□□□ -1.22
BRCA1-207ENST00000461798 OR52N4Q8NGI2 321 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 OR4C13Q8NGP0 309 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 RHOXF1Q8NHV9 184 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 EMG1Q92979 244 aaKnown RBP7.41□□□□□ -1.22
BRCA1-207ENST00000461798 FGGYQ96C11 551 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 FOXRED1Q96CU9 486 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-207ENST00000461798 LGALS12Q96DT0 336 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 PELI1Q96FA3 418 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 ZNF714Q96N38 554 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 ZNF649Q9BS31 505 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 RHOFQ9HBH0 211 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 HMG20AQ9NP66 347 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 MRPS18AQ9NVS2 196 aaKnown RBP7.41□□□□□ -1.22
BRCA1-207ENST00000461798 HHLA2Q9UM44 414 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 LINC00312Q9Y6C7 94 aa7.41□□□□□ -1.22
BRCA1-207ENST00000461798 NOTCH1P46531 2555 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 VWFP04275 2813 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 KRTAP4-8A0A0G2JLE6 195 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 MGST3O14880 152 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 CHST1O43916 411 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 MPZL2O60487 215 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 PSPNO60542 156 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 KDM4BO94953 1096 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 HTR1AP08908 422 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 BCL3P20749 454 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 PAX6P26367 422 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 EDDM3BP56851 147 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 ACTA2P62736 377 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 ACTG2P63267 376 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 MRPL28Q13084 256 aaKnown RBP7.4□□□□□ -1.22
BRCA1-207ENST00000461798 ALKBH1Q13686 389 aaKnown RBP7.4□□□□□ -1.22
BRCA1-207ENST00000461798 GALEQ14376 348 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 HERPUD1Q15011 391 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 LY6EQ16553 131 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 ZIK1Q3SY52 487 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-207ENST00000461798 PDLIM3Q53GG5 364 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-207ENST00000461798 LDLRAD2Q5SZI1 272 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 MINOS1Q5TGZ0 78 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 ZNF782Q6ZMW2 699 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-207ENST00000461798 LHFPL4Q7Z7J7 247 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 SAXO1Q8IYX7 474 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 DYNAPQ8N1N2 210 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 Q8N2B8 174 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 CFHR4Q92496 578 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 CORO2AQ92828 525 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 MRPL48Q96GC5 212 aaKnown RBP7.4□□□□□ -1.22
BRCA1-207ENST00000461798 Q96MT0 163 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 OPALINQ96PE5 141 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 SLC29A1Q99808 456 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 NPFFR1Q9GZQ6 430 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 INPP5EQ9NRR6 644 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 RBFOX1Q9NWB1 397 aaKnown RBP7.4□□□□□ -1.22
BRCA1-207ENST00000461798 GLS2Q9UI32 602 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 TCF19Q9Y242 345 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 GMPPBQ9Y5P6 360 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 MINOS1-NBL1R4GNA1 71 aa7.4□□□□□ -1.22
BRCA1-207ENST00000461798 CMYA5Q8N3K9 4069 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 IGKV1-12A0A0C4DH73 117 aa7.39□□□□□ -1.23
BRCA1-207ENST00000461798 A6NDX4 124 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms