RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 USH1CQ9Y6N9 552 aa3.09□□□□□ -1.91
UBA3-204ENST00000461522 V9GYY9 64 aa3.09□□□□□ -1.91
UBA3-204ENST00000461522 BPTFQ12830 3046 aa3.09□□□□□ -1.91
UBA3-204ENST00000461522 ZNF106Q9H2Y7 1883 aaKnown RBP3.09□□□□□ -1.92
UBA3-204ENST00000461522 DOCK9Q9BZ29 2069 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 UNC13CQ8NB66 2214 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 TNRC6BQ9UPQ9 1833 aaKnown RBP3.08□□□□□ -1.92
UBA3-204ENST00000461522 IGLV3-12A0A075B6K2 115 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 A0A1B0GVG6 124 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 SPAARA0A1B0GVQ0 90 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 A0A1W2PPE3 182 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 A0A1W2PRF3 423 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 A0A1W2PRM7 423 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 A8MVM7 634 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 C21orf140B9A014 251 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 E7EQ34 232 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 H0YGG7 62 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 CCRL2O00421 344 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 CASKO14936 926 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 ARPC5O15511 151 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 TGOLN2O43493 480 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 TNFSF12O43508 249 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 SERPINB7O75635 380 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 OR2B3O76000 313 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 SUPT7LO94864 414 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 GLSO94925 669 aaPredicted RBP3.08□□□□□ -1.92
UBA3-204ENST00000461522 THY1P04216 161 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 IFNW1P05000 195 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 KLK3P07288 261 aaPredicted RBP3.08□□□□□ -1.92
UBA3-204ENST00000461522 IFI6P09912 130 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 NBEAP1P0C6P0 100 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 SLC35G6P0C7Q6 338 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 SCGB1A1P11684 91 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 COX4I1P13073 169 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 GTF2F2P13984 249 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 FOLR1P15328 257 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 HLA-GP17693 338 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 TBXA2RP21731 343 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 ELK4P28324 431 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 BDKRB1P46663 353 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 EIF2B2P49770 351 aaKnown RBP3.08□□□□□ -1.92
UBA3-204ENST00000461522 AP2S1P53680 142 aaPredicted RBP3.08□□□□□ -1.92
UBA3-204ENST00000461522 FGF8P55075 233 aaPredicted RBP3.08□□□□□ -1.92
UBA3-204ENST00000461522 RAG2P55895 527 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 TMEM33P57088 247 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 GNG2P59768 71 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 RBX1P62877 108 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 FAM3AP98173 230 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 RGS1Q08116 209 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 RIPPLY1Q0D2K3 151 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 PSG5Q15238 335 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 HAGHQ16775 308 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 ZSWIM7Q19AV6 140 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 SLC22A6Q4U2R8 563 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 HES3Q5TGS1 186 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 C9orf135Q5VTT2 229 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 ZNF770Q6IQ21 691 aaPredicted RBP3.08□□□□□ -1.92
UBA3-204ENST00000461522 FAHD2BQ6P2I3 314 aaPredicted RBP3.08□□□□□ -1.92
UBA3-204ENST00000461522 FAM131AQ6UXB0 335 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 BTNL3Q6UXE8 466 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 TMUB2Q71RG4 321 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 COX15Q7KZN9 410 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 SSX6Q7RTT6 188 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 SLC16A14Q7RTX9 510 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 GOLGA7Q7Z5G4 137 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 ERI1Q8IV48 349 aaKnown RBP3.08□□□□□ -1.92
UBA3-204ENST00000461522 C10orf107Q8IVU9 208 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 NRMQ8IXM6 262 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 C4orf33Q8N1A6 199 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 STX19Q8N4C7 294 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 JAGN1Q8N5M9 183 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 C2orf73Q8N5S3 287 aaPredicted RBP3.08□□□□□ -1.92
UBA3-204ENST00000461522 OR5AU1Q8NGC0 362 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 OR5M9Q8NGP3 310 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 OR4Q3Q8NH05 313 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 FNDC8Q8TC99 324 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 YIPF5Q969M3 257 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 MARC2Q969Z3 335 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 TAMM41Q96BW9 452 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 CMTM7Q96FZ5 175 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 MED8Q96G25 268 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 FAHD2AQ96GK7 314 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 CXorf58Q96LI9 332 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 MAGEB18Q96M61 343 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 MBOAT4Q96T53 435 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 PFDN5Q99471 154 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 SERPINI1Q99574 410 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 TMED9Q9BVK6 235 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 FUNDC2Q9BWH2 189 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 YTHDF1Q9BYJ9 559 aaKnown RBP3.08□□□□□ -1.92
UBA3-204ENST00000461522 CCDC90BQ9GZT6 254 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 SPNS1Q9H2V7 528 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 RNF121Q9H920 327 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 FAM60AQ9NP50 221 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 SDHAF2Q9NX18 166 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 ANAPC11Q9NYG5 84 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 TREM2Q9NZC2 230 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 VPS29Q9UBQ0 182 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 MLXQ9UH92 298 aa3.08□□□□□ -1.92
UBA3-204ENST00000461522 TAC3Q9UHF0 121 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms