RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 C18orf12Q96KH6 178 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 SNX22Q96L94 193 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 MRPL37Q9BZE1 423 aaKnown RBP13.52□□□□□ -0.24
SSR4-206ENST00000460616 VN1R1Q9GZP7 353 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 LIME1Q9H400 295 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 PLEKHJ1Q9NW61 149 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 ANXA10Q9UJ72 324 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 PITPNC1Q9UKF7 332 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 POLR1DQ9Y2S0 133 aa13.52□□□□□ -0.24
SSR4-206ENST00000460616 TNRC6BQ9UPQ9 1833 aaKnown RBP13.52□□□□□ -0.25
SSR4-206ENST00000460616 CCDC187A0A096LP49 1063 aa13.52□□□□□ -0.25
SSR4-206ENST00000460616 B4DEV8 164 aa13.52□□□□□ -0.25
SSR4-206ENST00000460616 DVL1O14640 695 aa13.52□□□□□ -0.25
SSR4-206ENST00000460616 TGOLN2O43493 480 aa13.52□□□□□ -0.25
SSR4-206ENST00000460616 ZNF728P0DKX0 622 aa13.52□□□□□ -0.25
SSR4-206ENST00000460616 TMEM225BP0DP42 221 aa13.52□□□□□ -0.25
SSR4-206ENST00000460616 GZMBP10144 247 aa13.52□□□□□ -0.25
SSR4-206ENST00000460616 ZNF43P17038 809 aa13.52□□□□□ -0.25
SSR4-206ENST00000460616 CSNK1A1P48729 337 aa13.52□□□□□ -0.25
SSR4-206ENST00000460616 NUTF2P61970 127 aaKnown RBP13.52□□□□□ -0.25
SSR4-206ENST00000460616 ZNF506Q5JVG8 444 aa13.52□□□□□ -0.25
SSR4-206ENST00000460616 LIAT1Q6ZQX7 453 aa13.52□□□□□ -0.25
SSR4-206ENST00000460616 LRTM2Q8N967 370 aa13.52□□□□□ -0.25
SSR4-206ENST00000460616 POM121Q96HA1 1249 aa13.52□□□□□ -0.25
SSR4-206ENST00000460616 BOD1Q96IK1 185 aa13.52□□□□□ -0.25
SSR4-206ENST00000460616 HDHD3Q9BSH5 251 aaPredicted RBP13.52□□□□□ -0.25
SSR4-206ENST00000460616 NDUFAF3Q9BU61 184 aa13.52□□□□□ -0.25
SSR4-206ENST00000460616 ELL3Q9HB65 397 aaPredicted RBP13.52□□□□□ -0.25
SSR4-206ENST00000460616 FRYLO94915 3013 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 STMND1H3BQB6 276 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 TSPAN2O60636 221 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 BIDP55957 195 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 TLE3Q04726 772 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 PLCXD2Q0VAA5 305 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 HLA-DQA1Q5Y7H0 255 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 ZNF664Q8N3J9 261 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 OR2C3Q8N628 320 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 RCC1LQ96I51 464 aaKnown RBP13.51□□□□□ -0.25
SSR4-206ENST00000460616 HSF4Q9ULV5 492 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 LHFPL6Q9Y693 200 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 CPAMD8Q8IZJ3 1885 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 FAM24AA6NFZ4 105 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 ZNF850A8MQ14 1090 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 CYTIPO60759 359 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 CA11O75493 328 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 DBHP09172 617 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 ANOS1P23352 680 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 CCR5P51681 352 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 RPL23AP62750 156 aaKnown RBP13.51□□□□□ -0.25
SSR4-206ENST00000460616 DOK3Q7L591 496 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 SLC22A18ASQ8N1D0 253 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 SLC38A9Q8NBW4 561 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 BEND2Q8NDZ0 799 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 OR13H1Q8NG92 308 aa13.51□□□□□ -0.25
SSR4-206ENST00000460616 NXT1Q9UKK6 140 aaKnown RBP13.51□□□□□ -0.25
SSR4-206ENST00000460616 A0A1W2PPC4 97 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 HSPA12AO43301 675 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 ZNF205O95201 554 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 IGKV3-11P04433 115 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 GABRR1P24046 479 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 ALDH3B1P43353 468 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 PHLDA2Q53GA4 152 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 FAM57BQ71RH2 274 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 LGI3Q8N145 548 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 ZNF721Q8TF20 911 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 CA5BP1Q8WTZ4 195 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 TM2D1Q9BX74 207 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 B3GALT1Q9Y5Z6 326 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 ARHGEF17Q96PE2 2063 aaPredicted RBP13.5□□□□□ -0.25
SSR4-206ENST00000460616 CLDN34H7C241 214 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 OMGP23515 440 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 RRADP55042 308 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 C5orf24Q7Z6I8 188 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 OR5L1Q8NGL2 311 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 CLDND2Q8NHS1 167 aa13.5□□□□□ -0.25
SSR4-206ENST00000460616 TMEM131Q92545 1883 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 KIR2DS5A0A0G2JLQ3 304 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 A0A0G2JNG1 304 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 KIR2DS3K7RE56 304 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 DDAH2O95865 285 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 AKT2P31751 481 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 PPM1FP49593 454 aaPredicted RBP13.49□□□□□ -0.25
SSR4-206ENST00000460616 FXYD4P59646 89 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 DCAF7P61962 342 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 GABREP78334 506 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 HHEXQ03014 270 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 KIR2DS5Q14953 304 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 SP5Q6BEB4 398 aaPredicted RBP13.49□□□□□ -0.25
SSR4-206ENST00000460616 CRIP3Q6Q6R5 217 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 Q6ZSR6 202 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 P4HA3Q7Z4N8 544 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 TMEM183AQ8IXX5 376 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 RNASEH2CQ8TDP1 164 aaKnown RBP13.49□□□□□ -0.25
SSR4-206ENST00000460616 HAS2Q92819 552 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 TSLPQ969D9 159 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 MSI2Q96DH6 328 aaKnown RBP13.49□□□□□ -0.25
SSR4-206ENST00000460616 RBMXL1Q96E39 390 aaKnown RBP13.49□□□□□ -0.25
SSR4-206ENST00000460616 NUDT22Q9BRQ3 303 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 GPR87Q9BY21 358 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 NECAP2Q9NVZ3 263 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms