RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 RBFOX1Q9NWB1 397 aaKnown RBP12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 FOXJ3Q9UPW0 622 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 TBL2Q9Y4P3 447 aaKnown RBP12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 hADV38S2A0JD32 116 aa12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 CHST1O43916 411 aa12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 ZNF737O75373 536 aa12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 HTR1AP08908 422 aa12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 PRKACAP17612 351 aa12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 AZGP1P25311 298 aaKnown RBP12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 PEX2P28328 305 aa12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 KIR2DS4P43632 304 aa12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 EFNB2P52799 333 aa12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 DLX6P56179 175 aa12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 MTCP1P56278 107 aa12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 SSX2Q16385 188 aa12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 ZNF676Q8N7Q3 588 aa12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 TPRX1Q8N7U7 411 aa12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 DTX3Q8N9I9 347 aa12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 OR2G2Q8NGZ5 317 aa12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 ADAT3Q96EY9 351 aaPredicted RBP12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 IL36RNQ9UBH0 155 aa12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 GLS2Q9UI32 602 aa12.75□□□□□ -0.37
CHCHD3-204ENST00000457942 TMEM82A0PJX8 343 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 SNTNA6NMZ2 147 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 ENTPD6O75354 484 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 PEX14O75381 377 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 IGHA1P01876 353 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 RBP4P02753 201 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 ALPLP05186 524 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 IGHV1-8P0DP01 117 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 CALCBP10092 127 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 BCL3P20749 454 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 PRKACBP22694 351 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 DUSP1P28562 367 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 RAB13P51153 203 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 MEF2CQ06413 473 aaPredicted RBP12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 SAMD5Q5TGI4 173 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 LHFPL2Q6ZUX7 228 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 TMEM219Q86XT9 240 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 FAM58AQ8N1B3 248 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 OR13C3Q8NGS6 347 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 NDNFQ8TB73 568 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 RPS4Y2Q8TD47 263 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 TRUB1Q8WWH5 349 aaKnown RBP12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 RFT1Q96AA3 541 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 FGGYQ96C11 551 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 MRPL48Q96GC5 212 aaKnown RBP12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 SLC29A1Q99808 456 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 NEK6Q9HC98 313 aa12.74□□□□□ -0.37
CHCHD3-204ENST00000457942 TRBV2A0A0J9YWF9 115 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 ODF3BA8MYP8 253 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 SIRPB1O00241 398 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 F2RL2O00254 374 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 SLC16A6O15403 523 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 ATF1P18846 271 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 NPBWR2P48146 333 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 ALDH3A2P51648 485 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 OR12D2P58182 307 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 ISL1P61371 349 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 ACTA2P62736 377 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 ACTG2P63267 376 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 ZNF91Q05481 1191 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 SLC34A1Q06495 639 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 GABPB1Q06547 395 aaPredicted RBP12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 MEDAGQ5VYS4 303 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 ZNF626Q68DY1 528 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 KCTD20Q7Z5Y7 419 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 C10orf67Q8IYJ2 551 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 DYNAPQ8N1N2 210 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 DNAAF1Q8NEP3 725 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 MALSU1Q96EH3 234 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 OPALINQ96PE5 141 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 MBOAT4Q96T53 435 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 AASSQ9UDR5 926 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 PITPNC1Q9UKF7 332 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 HHLA2Q9UM44 414 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 TCF19Q9Y242 345 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 GSTK1Q9Y2Q3 226 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 PCDHGB5Q9Y5G0 923 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 HILPDAQ9Y5L2 63 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 LINC00312Q9Y6C7 94 aa12.73□□□□□ -0.37
CHCHD3-204ENST00000457942 FAM90A8PA6NJQ4 464 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 J3QLW9 94 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 VSIG8P0DPA2 414 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 ZNF19P17023 458 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 RCN1Q15293 331 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 LRRC36Q1X8D7 754 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 SPIN3Q5JUX0 258 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 CRIP3Q6Q6R5 217 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 UTS2BQ765I0 119 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 TCF23Q7RTU1 214 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 OR11H6Q8NGC7 330 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 OR52N4Q8NGI2 321 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 OR5D18Q8NGL1 313 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 OR13C9Q8NGT0 318 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 SPSB1Q96BD6 273 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 HRASLS5Q96KN8 279 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 C4orf36Q96KX1 117 aa12.72□□□□□ -0.37
CHCHD3-204ENST00000457942 C9orf16Q9BUW7 83 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms