RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 UQCC1Q9NVA1 299 aa9.8□□□□□ -0.84
DDR1-240ENST00000454612 MED9Q9NWA0 146 aa9.8□□□□□ -0.84
DDR1-240ENST00000454612 ZNF581Q9P0T4 197 aa9.8□□□□□ -0.84
DDR1-240ENST00000454612 BORCS7-ASMTA0A0B4J1R7 106 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 PMS2P1A4D2B8 440 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 RNASEK-C17orf49H0YIS7 233 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 HMGB3O15347 200 aaKnown RBP9.79□□□□□ -0.84
DDR1-240ENST00000454612 CLPSP04118 112 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 NDUFB7P17568 137 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 DUSP3P51452 185 aaPredicted RBP9.79□□□□□ -0.84
DDR1-240ENST00000454612 TMEM128Q5BJH2 165 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 TMEM182Q6ZP80 229 aaPredicted RBP9.79□□□□□ -0.84
DDR1-240ENST00000454612 OR2M3Q8NG83 312 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 SHISA7A6NL88 538 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 OR6C76A6NM76 312 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 RPL12P30050 165 aaKnown RBP9.79□□□□□ -0.84
DDR1-240ENST00000454612 ALKBH6Q3KRA9 238 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 PLPP5Q8NEB5 264 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 OR9K2Q8NGE7 335 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 OR10D3Q8NH80 312 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 FRZBQ92765 325 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 LPAR5Q9H1C0 372 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 NCOA6Q14686 2063 aaPredicted RBP9.79□□□□□ -0.84
DDR1-240ENST00000454612 A0A0G2JMM0 328 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 A0A1W2PPB8 328 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 A0A1W2PRS3 328 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 MSGN1A6NI15 193 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 KIR3DP1A8MWS1 328 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 WDR1O75083 606 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 AQP8O94778 261 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 OR2F2O95006 317 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 BPNT1O95861 308 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 RFPL3SP0C7P2 107 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 PET100P0DJ07 73 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 PAX6P26367 422 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 TAS2R31P59538 309 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 OR2F1Q13607 317 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 ZNF684Q5T5D7 378 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 TMEM268Q5VZI3 342 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 MRPL24Q96A35 216 aaKnown RBP9.79□□□□□ -0.84
DDR1-240ENST00000454612 ABI3Q9P2A4 366 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 AMDHD2Q9Y303 409 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 KPTNQ9Y664 436 aa9.79□□□□□ -0.84
DDR1-240ENST00000454612 IGKV3D-11A0A0A0MRZ8 115 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 MMP16P51512 607 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 CCL11P51671 97 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 TAS2R46P59540 309 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 HAGHQ16775 308 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 IZUMO4Q1ZYL8 232 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 ISXQ2M1V0 245 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 SLC30A7Q8NEW0 376 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 CPT1CQ8TCG5 803 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 SERPINE2P07093 398 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 MMP7P09237 267 aaPredicted RBP9.78□□□□□ -0.84
DDR1-240ENST00000454612 GRB2P62993 217 aaKnown RBP9.78□□□□□ -0.84
DDR1-240ENST00000454612 UBE2V2Q15819 145 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 ZNF260Q3ZCT1 412 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 KDF1Q8NAX2 398 aaPredicted RBP9.78□□□□□ -0.84
DDR1-240ENST00000454612 ZFP62Q8NB50 900 aaPredicted RBP9.78□□□□□ -0.84
DDR1-240ENST00000454612 OR10C1Q96KK4 312 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 FOXB1Q99853 325 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 LOXL2Q9Y4K0 774 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 PCNX2A6NKB5 2137 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 GPR37O15354 613 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 CYB5BO43169 146 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 GP1BAP07359 652 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 OR5AC1P0C628 307 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 PRF1P14222 555 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 SELEP16581 610 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 CHATP28329 748 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 S100GP29377 79 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 PLAC9Q5JTB6 97 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 PHYHD1Q5SRE7 291 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 FNDC7Q5VTL7 733 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 MKXQ8IYA7 352 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 OCSTAMPQ9BR26 566 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 PPP1R3CQ9UQK1 317 aa9.78□□□□□ -0.84
DDR1-240ENST00000454612 ZNF729A6NN14 1252 aaPredicted RBP9.77□□□□□ -0.84
DDR1-240ENST00000454612 TRAPPC2LH3BP13 241 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 SIRPB1O00241 398 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 BCL2L11O43521 198 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 SSSCA1O60232 199 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 HOXC12P31275 282 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 GABRA4P48169 554 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 F2RL1P55085 397 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 ATP1A1-AS1Q5TC04 95 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 UQCC3Q6UW78 93 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 SLC36A1Q7Z2H8 476 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 LYZL2Q7Z4W2 148 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 ZNF808Q8N4W9 903 aaPredicted RBP9.77□□□□□ -0.84
DDR1-240ENST00000454612 OR56B2PQ8NGI1 322 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 OR10S1Q8NGN2 331 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 SDSLQ96GA7 329 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 SYT3Q9BQG1 590 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 CEP295Q9C0D2 2601 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 STRADBQ9C0K7 418 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 C1orf123Q9NWV4 160 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 KLF2Q9Y5W3 355 aaPredicted RBP9.77□□□□□ -0.84
DDR1-240ENST00000454612 NPTNQ9Y639 398 aa9.77□□□□□ -0.84
DDR1-240ENST00000454612 TRAF3IP2O43734 574 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms