RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 CAV3P56539 151 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 IL13RA2Q14627 380 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 HES5Q5TA89 166 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 ZNF788Q6ZQV5 615 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 LINC00596Q86U02 117 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 OSR2Q8N2R0 312 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 C19orf18Q8NEA5 215 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 DEFB108BQ8NET1 73 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 WFDC11Q8NEX6 87 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 Q96MF0 132 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 IGHV3OR15-7A0A075B7D8 119 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 SMIM30A4D0T7 59 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 CEACAM18A8MTB9 384 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 CALCBP10092 127 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 SLC2A2P11168 524 aaPredicted RBP9.67□□□□□ -0.86
SCN9A-204ENST00000452182 MGMTP16455 207 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 AMY2BP19961 511 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 RORCP51449 518 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 CLDN12P56749 244 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 GMFBP60983 142 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 LOXL1Q08397 574 aaPredicted RBP9.67□□□□□ -0.86
SCN9A-204ENST00000452182 DYNC1I2Q13409 638 aaKnown RBP9.67□□□□□ -0.86
SCN9A-204ENST00000452182 SPCS2Q15005 226 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 P2RY14Q15391 338 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 C2orf76Q3KRA6 126 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 SLC36A1Q7Z2H8 476 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 BATF2Q8N1L9 274 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 TMEM104Q8NE00 496 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 OR51D1Q8NGF3 324 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 OR10K1Q8NGX5 313 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 PTX4Q96A99 478 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 DGCR14Q96DF8 476 aaKnown RBP9.67□□□□□ -0.86
SCN9A-204ENST00000452182 SDSLQ96GA7 329 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 GAL3ST1Q99999 423 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 IFT22Q9H7X7 185 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 PATZ1Q9HBE1 687 aaKnown RBP9.67□□□□□ -0.86
SCN9A-204ENST00000452182 ABRACLQ9P1F3 81 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 MIOXQ9UGB7 285 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 GLS2Q9UI32 602 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 DAPK2Q9UIK4 370 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 ST3GAL6Q9Y274 331 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 MAP1AP78559 2803 aaPredicted RBP9.66□□□□□ -0.86
SCN9A-204ENST00000452182 NOTCH2Q04721 2471 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 IGHV4-61A0A0C4DH41 118 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 A0A1W2PP11 408 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 FAM90A10PA6NDY2 464 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 FAM90A18PA6NE21 464 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 FAM90A16PA6NEW6 464 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 CCDC160A6NGH7 325 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 FAM90A20PA6NIJ5 464 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 FAM90A8PA6NJQ4 464 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 FAM90A7PA6NKC0 464 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 RFPL4AA6NLU0 287 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 FAM90A22PA8MWA6 464 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 FAM90A12PA8MX19 464 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 FAM90A5PA8MXJ8 464 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 FAM90A23PA8MXZ1 464 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 F5H0A9 414 aaPredicted RBP9.66□□□□□ -0.86
SCN9A-204ENST00000452182 RFPL4AL1F8VTS6 287 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 SH2D1BO14796 132 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 CRTAPO75718 401 aaPredicted RBP9.66□□□□□ -0.86
SCN9A-204ENST00000452182 GYPAP02724 150 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 FAM90A15PP0C7V4 464 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 FAM90A13PP0C7W8 464 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 FAM90A14PP0C7W9 464 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 FAM90A24PP0C7X0 464 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 USF1P22415 310 aaPredicted RBP9.66□□□□□ -0.86
SCN9A-204ENST00000452182 LMO1P25800 156 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 PRDX2P32119 198 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 RBM11P57052 281 aaKnown RBP9.66□□□□□ -0.86
SCN9A-204ENST00000452182 LMO4P61968 165 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 UNC119Q13432 240 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 FAM189A2Q15884 450 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 MPV17LQ2QL34 196 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 CHST4Q8NCG5 386 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 OR5T2Q8NGG2 359 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 CLDND2Q8NHS1 167 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 MED30Q96HR3 178 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 Q96M66 194 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 TM2D1Q9BX74 207 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 REG4Q9BYZ8 158 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 BARHL1Q9BZE3 327 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 ZNF665Q9H7R5 613 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 BATF3Q9NR55 127 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 IL36RNQ9UBH0 155 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 CCDC168Q8NDH2 2452 aa9.66□□□□□ -0.86
SCN9A-204ENST00000452182 OTOGQ6ZRI0 2925 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 NKX6-3A6NJ46 265 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 H3BUI4 141 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 SIGLEC5O15389 551 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 TMPRSS2O15393 492 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 HAND1O96004 215 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 IGHV2-5P01817 119 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 CHRM2P08172 466 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 WNT2P09544 360 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 RAB6AP20340 208 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 RPS27AP62979 156 aaKnown RBP9.65□□□□□ -0.86
SCN9A-204ENST00000452182 PIGYQ3MUY2 71 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 IDNKQ5T6J7 187 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 SPNS3Q6ZMD2 512 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms