RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 BCL3P20749 454 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 PRKACBP22694 351 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 POU3F4P49335 361 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 ATP1B3P54709 279 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 MTCP1P56278 107 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 MEF2CQ06413 473 aaPredicted RBP10.11□□□□□ -0.79
CPSF4-208ENST00000452047 ALKBH1Q13686 389 aaKnown RBP10.11□□□□□ -0.79
CPSF4-208ENST00000452047 GALEQ14376 348 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 ZNF146Q15072 292 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 LY6EQ16553 131 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 LDLRAD2Q5SZI1 272 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 LHFPL2Q6ZUX7 228 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 GDPD3Q7L5L3 318 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 RNF144BQ7Z419 303 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 LHFPL4Q7Z7J7 247 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 FAM58AQ8N1B3 248 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 DYNAPQ8N1N2 210 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 OR52N4Q8NGI2 321 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 RHOXF1Q8NHV9 184 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 OPALINQ96PE5 141 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 C9orf16Q9BUW7 83 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 ALG8Q9BVK2 526 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 FBLN5Q9UBX5 448 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 HHLA2Q9UM44 414 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 MYRFQ9Y2G1 1151 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 TGP01266 2768 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 IGKV1-12A0A0C4DH73 117 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 VGLL3A8MV65 326 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 M0QZ24 198 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 CHST1O43916 411 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 IGKV1D-12P01611 117 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 MT-ND2P03891 347 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 IGHV1-8P0DP01 117 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 DUSP1P28562 367 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 LGALS4P56470 323 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 PDZK1IP1Q13113 114 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 EDDM3AQ14507 147 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 SPIN3Q5JUX0 258 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 ZNF626Q68DY1 528 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 LHFPL3Q86UP9 236 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 SYS1Q8N2H4 156 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 PQLC1Q8N2U9 271 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 OR11H6Q8NGC7 330 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 OR13C3Q8NGS6 347 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 OR13C9Q8NGT0 318 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 RFT1Q96AA3 541 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 ZNF714Q96N38 554 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 SPACA5Q96QH8 159 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 CHST6Q9GZX3 395 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 MMP27Q9H306 513 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 ISG20L2Q9H9L3 353 aaKnown RBP10.1□□□□□ -0.79
CPSF4-208ENST00000452047 TCF7L1Q9HCS4 588 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 S100A14Q9HCY8 104 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 TBL2Q9Y4P3 447 aaKnown RBP10.1□□□□□ -0.79
CPSF4-208ENST00000452047 LINC00312Q9Y6C7 94 aa10.1□□□□□ -0.79
CPSF4-208ENST00000452047 TET2Q6N021 2002 aaPredicted RBP10.09□□□□□ -0.79
CPSF4-208ENST00000452047 LOC100130705A0A1B0GUX0 176 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 MPZL2O60487 215 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 ZFPL1O95159 310 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 CYB5AP00167 134 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 CALCBP10092 127 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 PRKACAP17612 351 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 GABRA5P31644 462 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 KIR2DS4P43632 304 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 OR3A1P47881 315 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 EFNB2P52799 333 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 RAB40BQ12829 278 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 GRK1Q15835 563 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 LIAT1Q6ZQX7 453 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 ZBTB49Q6ZSB9 765 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 ZNF676Q8N7Q3 588 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 TPRX1Q8N7U7 411 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 OR4S1Q8NGB4 309 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 OR13D1Q8NGV5 346 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 APH1BQ8WW43 257 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 FOXRED1Q96CU9 486 aaPredicted RBP10.09□□□□□ -0.79
CPSF4-208ENST00000452047 MRPL48Q96GC5 212 aaKnown RBP10.09□□□□□ -0.79
CPSF4-208ENST00000452047 RANBP3Q9H6Z4 567 aaPredicted RBP10.09□□□□□ -0.79
CPSF4-208ENST00000452047 HMG20AQ9NP66 347 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 AMBNQ9NP70 447 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 RAB18Q9NP72 206 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 INPP5EQ9NRR6 644 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 MRPS18AQ9NVS2 196 aaKnown RBP10.09□□□□□ -0.79
CPSF4-208ENST00000452047 FAM118AQ9NWS6 357 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 ERVK13-1Q9NX77 482 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 SIGLEC9Q9Y336 463 aa10.09□□□□□ -0.79
CPSF4-208ENST00000452047 PRKDCP78527 4128 aaKnown RBP10.08□□□□□ -0.8
CPSF4-208ENST00000452047 hADV38S2A0JD32 116 aa10.08□□□□□ -0.8
CPSF4-208ENST00000452047 E9PI62 339 aa10.08□□□□□ -0.8
CPSF4-208ENST00000452047 MGST3O14880 152 aa10.08□□□□□ -0.8
CPSF4-208ENST00000452047 KDM4BO94953 1096 aa10.08□□□□□ -0.8
CPSF4-208ENST00000452047 ALX3O95076 343 aa10.08□□□□□ -0.8
CPSF4-208ENST00000452047 TSPAN15O95858 294 aa10.08□□□□□ -0.8
CPSF4-208ENST00000452047 FADS2O95864 444 aaKnown RBP10.08□□□□□ -0.8
CPSF4-208ENST00000452047 ARG1P05089 322 aa10.08□□□□□ -0.8
CPSF4-208ENST00000452047 GABRR1P24046 479 aa10.08□□□□□ -0.8
CPSF4-208ENST00000452047 PEX2P28328 305 aa10.08□□□□□ -0.8
CPSF4-208ENST00000452047 ERP29P30040 261 aaKnown RBP10.08□□□□□ -0.8
CPSF4-208ENST00000452047 SNU13P55769 128 aaKnown RBP10.08□□□□□ -0.8
CPSF4-208ENST00000452047 OR52I1Q8NGK6 324 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms