RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 FAM166AQ6J272 317 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 OR2AJ1Q8NGZ0 328 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 ALKBH3Q96Q83 286 aaPredicted RBP11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 VPS25Q9BRG1 176 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 ABHD6Q9BV23 337 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 PNO1Q9NRX1 252 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 CENPMQ9NSP4 180 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 SRPK3Q9UPE1 567 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 H0YIG0 161 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 IL15RAQ13261 267 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 ACKR1Q16570 336 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 HOGA1Q86XE5 327 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 CLDN23Q96B33 292 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 SH3BGRL3Q9H299 93 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 LRFN1Q9P244 771 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 HSF4Q9ULV5 492 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 SLC22A13Q9Y226 551 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 CACNA1CQ13936 2221 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 A0A1W2PQD3 144 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 SRP19P09132 144 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 MMP16P51512 607 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 SUCLG1P53597 346 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 ELLP55199 621 aaPredicted RBP11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 RND3P61587 244 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 CCL20P78556 96 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 CHD3Q12873 2000 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 SLC25A26Q70HW3 274 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 COMMD2Q86X83 199 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 CYB561D1Q8N8Q1 229 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 FKBP11Q9NYL4 201 aa11.82□□□□□ -0.52
SYNGAP1-204ENST00000449372 CLDN34H7C241 214 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 SOX1O00570 391 aaPredicted RBP11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 ATXN7O15265 892 aaPredicted RBP11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 LMO1P25800 156 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 RAB7AP51149 207 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 EMP2P54851 167 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 CFHR1Q03591 330 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 COL5A1-AS1Q5SY13 56 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 GRINAQ7Z429 371 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 DNASE2BQ8WZ79 361 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 TSLPQ969D9 159 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 TMEM230Q96A57 120 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 C5orf66Q9H5L9 145 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 CDH20Q9HBT6 801 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 CGGBP1Q9UFW8 167 aaPredicted RBP11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 AMY2BP19961 511 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 APOBEC1P41238 236 aaKnown RBP11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 ALDH3B1P43353 468 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 CLDN6P56747 220 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 PLCXD2Q0VAA5 305 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 LCN10Q6JVE6 187 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 AQP3Q92482 292 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 GPER1Q99527 375 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 PRRX2Q99811 253 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 CABLES2Q9BTV7 478 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 ARV1Q9H2C2 271 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 EMC9Q9Y3B6 208 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 K7ESF4 209 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 VAMP2P63027 116 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 TMEM182Q6ZP80 229 aaPredicted RBP11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 NUFIP2Q7Z417 695 aaKnown RBP11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 KTI12Q96EK9 354 aaPredicted RBP11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 LSM5Q9Y4Y9 91 aaKnown RBP11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 LRP12Q9Y561 859 aa11.81□□□□□ -0.52
SYNGAP1-204ENST00000449372 CMBLQ96DG6 245 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 MRPS18BQ9Y676 258 aaKnown RBP11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 WDFY3Q8IZQ1 3526 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 TMED7-TICAM2A0A0A6YYA0 188 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 TRBV11-1A0A0K0K1C0 115 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 FIGNL2A6NMB9 653 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 BGLAPP02818 100 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 LCATP04180 440 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 BCKDHBP21953 392 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 CCKARP32238 428 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 HLA-DRB3P79483 266 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 IAH1Q2TAA2 248 aaPredicted RBP11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 C1orf140Q5VVS0 124 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 ZNF880Q6PDB4 577 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 SPEM1Q8N4L4 309 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 TP53RKQ96S44 253 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 LIPGQ9Y5X9 500 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 NKX6-3A6NJ46 265 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 ZNF705FA8MVS1 300 aaPredicted RBP11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 B4DEV8 164 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 ZNF705DP0CH99 300 aaPredicted RBP11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 ZNF705BP0CI00 300 aaPredicted RBP11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 IGFBP3P17936 291 aaPredicted RBP11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 FPR2P25090 351 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 CHRNB4P30926 498 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 EFNA3P52797 238 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 DEFB133Q30KQ1 61 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 COA6Q5JTJ3 125 aaKnown RBP11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 LRRC69Q6ZNQ3 347 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 TMEM156Q8N614 296 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 GINS3Q9BRX5 216 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 MSL2Q9HCI7 577 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 GPR132Q9UNW8 380 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 MRPS17Q9Y2R5 130 aaKnown RBP11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 WSB1Q9Y6I7 421 aa11.8□□□□□ -0.52
SYNGAP1-204ENST00000449372 COL6A3P12111 3177 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms