RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 JAGN1Q8N5M9 183 aa11.62□□□□□ -0.55
GTF3C3-206ENST00000448539 ASCC1Q8N9N2 400 aaKnown RBP11.62□□□□□ -0.55
GTF3C3-206ENST00000448539 PXT1Q8NFP0 134 aa11.62□□□□□ -0.55
GTF3C3-206ENST00000448539 SLITRK2Q9H156 845 aa11.62□□□□□ -0.55
GTF3C3-206ENST00000448539 TCF7L1Q9HCS4 588 aa11.62□□□□□ -0.55
GTF3C3-206ENST00000448539 ING4Q9UNL4 249 aa11.62□□□□□ -0.55
GTF3C3-206ENST00000448539 MAB21L2Q9Y586 359 aa11.62□□□□□ -0.55
GTF3C3-206ENST00000448539 SONP18583 2426 aaKnown RBP11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 CUBNO60494 3623 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 TRAV8-7A0A075B6U6 113 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 IGKV1-12A0A0C4DH73 117 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 MEGF11A6BM72 1044 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 SH2D1BO14796 132 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 HAND1O96004 215 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 AVPP01185 164 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 IGKV1D-12P01611 117 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 PPIAL4GP0DN37 164 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 ADRA2CP18825 462 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 PTGFRP43088 359 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 FGF12P61328 243 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 COL10A1Q03692 680 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 METTL11BQ5VVY1 283 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 ZNF773Q6PK81 442 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 C1QL2Q7Z5L3 287 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 PHC2Q8IXK0 858 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 SPARTQ8N0X7 666 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 FGFRL1Q8N441 504 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 NKAIN3Q8N8D7 197 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 FCGR1BQ92637 280 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 MDFIQ99750 246 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 DCTN5Q9BTE1 182 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 METTL9Q9H1A3 318 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 CNTD2Q9H8S5 307 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 HMG20AQ9NP66 347 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 PCDHB16Q9NRJ7 776 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 OPN4Q9UHM6 478 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 RPUSD1Q9UJJ7 312 aaKnown RBP11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 GSTK1Q9Y2Q3 226 aa11.61□□□□□ -0.55
GTF3C3-206ENST00000448539 A0A1W2PQ09 198 aa11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 PIN1P1O15428 100 aa11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 FCN3O75636 299 aa11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 RGS9O75916 674 aaPredicted RBP11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 CSTBP04080 98 aaKnown RBP11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 SFTPBP07988 381 aa11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 GABRR1P24046 479 aa11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 OR3A4PP47883 348 aa11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 MTNR1BP49286 362 aa11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 RPS25P62851 125 aaKnown RBP11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 INSL4Q14641 139 aa11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 KCTD21Q4G0X4 260 aa11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 HSD17B12Q53GQ0 312 aa11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 UNQ9370/PRO34162Q6UXP9 181 aa11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 C1orf229Q6ZS94 237 aaPredicted RBP11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 CMTM4Q8IZR5 234 aa11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 OR5D13Q8NGL4 314 aa11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 PPP1R35Q8TAP8 253 aa11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 DACT3Q96B18 629 aaPredicted RBP11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 PCGF1Q9BSM1 259 aa11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 FAM234AQ9H0X4 552 aa11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 EXOSC4Q9NPD3 245 aaKnown RBP11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 ONECUT1Q9UBC0 465 aa11.6□□□□□ -0.55
GTF3C3-206ENST00000448539 ARHGAP32A7KAX9 2087 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 TRBV23-1A0A0A0MS06 115 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 MAGEA13PA6NCF6 341 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 ARL6IP5O75915 188 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 TOX4O94842 621 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 CDRT1O95170 752 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 HTR3BO95264 441 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 TK1P04183 234 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 ZNF44P15621 663 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 PSMB9P28065 219 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 DUSP1P28562 367 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 GABRA5P31644 462 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 ARF6P62330 175 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 SCN1BQ07699 218 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 ZNF146Q15072 292 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 FAM27D1Q5T7N8 215 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 UBE2UQ5VVX9 321 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 CRIP3Q6Q6R5 217 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 GDPD3Q7L5L3 318 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 CDH26Q8IXH8 852 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 FAM185AQ8N0U4 392 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 TBC1D15Q8TC07 691 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 PHYHIPQ92561 330 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 SNX22Q96L94 193 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 DMRTB1Q96MA1 342 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 NR1H4Q96RI1 486 aaPredicted RBP11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 NKX3-1Q99801 234 aaPredicted RBP11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 SEBOXQ9HB31 216 aaPredicted RBP11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 IL36RNQ9UBH0 155 aa11.59□□□□□ -0.55
GTF3C3-206ENST00000448539 FBN1P35555 2871 aaKnown RBP11.58□□□□□ -0.56
GTF3C3-206ENST00000448539 A0A1W2PPH5 198 aa11.58□□□□□ -0.56
GTF3C3-206ENST00000448539 K7N7A8 449 aa11.58□□□□□ -0.56
GTF3C3-206ENST00000448539 ZNF780AO75290 641 aaPredicted RBP11.58□□□□□ -0.56
GTF3C3-206ENST00000448539 TNFAIP8O95379 198 aa11.58□□□□□ -0.56
GTF3C3-206ENST00000448539 UCHL1P09936 223 aa11.58□□□□□ -0.56
GTF3C3-206ENST00000448539 SRMP19623 302 aa11.58□□□□□ -0.56
GTF3C3-206ENST00000448539 EPHA1P21709 976 aa11.58□□□□□ -0.56
GTF3C3-206ENST00000448539 EDDM3BP56851 147 aa11.58□□□□□ -0.56
GTF3C3-206ENST00000448539 RPL31P62899 125 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms