RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 PIPP12273 146 aaPredicted RBP10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 CCL3L1P16619 93 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 PRKACAP17612 351 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 EEF1B2P24534 225 aaKnown RBP10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 CFPP27918 469 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 SOX2P48431 317 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 UBE2E1P51965 193 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 ERVFRD-1P60508 538 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 SLC34A1Q06495 639 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 CDK5R1Q15078 307 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 KISS1Q15726 138 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 AWAT1Q58HT5 328 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 NCR3LG1Q68D85 454 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 C17orf107Q6ZR85 190 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 C3orf56Q8N813 242 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 ZNF485Q8NCK3 441 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 OR52N4Q8NGI2 321 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 OR5D18Q8NGL1 313 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 OR5D13Q8NGL4 314 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 TBC1D15Q8TC07 691 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 NRG4Q8WWG1 115 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 SNX22Q96L94 193 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 CHIAQ9BZP6 476 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 HMG20AQ9NP66 347 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 PLCXD1Q9NUJ7 323 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 CHCHD3Q9NX63 227 aaKnown RBP10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 PSORS1C1Q9UIG5 152 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 FAM96BQ9Y3D0 163 aa10.42□□□□□ -0.74
PRPF40A-203ENST00000448428 A0A1W2PPH5 198 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 EFCAB10A6NFE3 127 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 HAX1O00165 279 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 KDM4BO94953 1096 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 IGHV4-59P01825 116 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 HCKP08631 526 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 IER3P46695 156 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 SNU13P55769 128 aaKnown RBP10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 DLX6P56179 175 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 FOXL1Q12952 345 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 MED21Q13503 144 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 ZNF273Q14593 569 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 ZNF146Q15072 292 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 ASPHD2Q6ICH7 369 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 ZNF529Q6P280 563 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 FIP1L1Q6UN15 594 aaKnown RBP10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 GDPD3Q7L5L3 318 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 LDLRAD3Q86YD5 345 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 SAXO1Q8IYX7 474 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 OR8H2Q8N162 312 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 TMEM86BQ8N661 226 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 BPIFB6Q8NFQ5 453 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 OR51A2Q8NGJ7 313 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 OR52N1Q8NH53 320 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 GPR148Q8TDV2 347 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 SSMEM1Q8WWF3 244 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 VCXQ9H320 206 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 NEK6Q9HC98 313 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 CNOT2Q9NZN8 540 aaKnown RBP10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 ZNF281Q9Y2X9 895 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 SF3B6Q9Y3B4 125 aaKnown RBP10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 POMT1Q9Y6A1 747 aa10.41□□□□□ -0.74
PRPF40A-203ENST00000448428 MEX3AA1L020 520 aaKnown RBP10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 MEIOCA2RUB1 952 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 FAM181BA6NEQ2 426 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 ERICH4A6NGS2 130 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 SH2D1BO14796 132 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 PSPNO60542 156 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 TMEM225BP0DP42 221 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 RAB3AP20336 220 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 GABRR1P24046 479 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 C21orf33P30042 268 aaPredicted RBP10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 SAA4P35542 130 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 EDDM3BP56851 147 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 ZP1P60852 638 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 SPIN3Q5JUX0 258 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 DMKNQ6E0U4 476 aaPredicted RBP10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 AHSA2Q719I0 299 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 ZFP41Q8N8Y5 198 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 ZSCAN4Q8NAM6 433 aaPredicted RBP10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 OR4S1Q8NGB4 309 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 GHSRQ92847 366 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 TMEM106AQ96A25 262 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 SMIM19Q96E16 107 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 HEXA-AS1Q9H8Q6 139 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 TAS2R4Q9NYW5 299 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 GLS2Q9UI32 602 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 GSTK1Q9Y2Q3 226 aa10.4□□□□□ -0.74
PRPF40A-203ENST00000448428 hCG_1809904A0A1W2PP81 198 aa10.39□□□□□ -0.75
PRPF40A-203ENST00000448428 A0A1W2PPE2 198 aa10.39□□□□□ -0.75
PRPF40A-203ENST00000448428 A0A1W2PR64 198 aa10.39□□□□□ -0.75
PRPF40A-203ENST00000448428 A0A1W2PRV1 198 aa10.39□□□□□ -0.75
PRPF40A-203ENST00000448428 C17orf98A8MV24 154 aa10.39□□□□□ -0.75
PRPF40A-203ENST00000448428 OR2H2O95918 312 aa10.39□□□□□ -0.75
PRPF40A-203ENST00000448428 CD2P06729 351 aa10.39□□□□□ -0.75
PRPF40A-203ENST00000448428 FBP1P09467 338 aa10.39□□□□□ -0.75
PRPF40A-203ENST00000448428 ZNF728P0DKX0 622 aa10.39□□□□□ -0.75
PRPF40A-203ENST00000448428 OMGP23515 440 aa10.39□□□□□ -0.75
PRPF40A-203ENST00000448428 RPS11P62280 158 aaKnown RBP eCLIP10.39□□□□□ -0.75
PRPF40A-203ENST00000448428 ACSM1Q08AH1 577 aa10.39□□□□□ -0.75
PRPF40A-203ENST00000448428 EDDM3AQ14507 147 aa10.39□□□□□ -0.75
PRPF40A-203ENST00000448428 GRK1Q15835 563 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms