RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 WDR13Q9H1Z4 485 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 MARF1Q9Y4F3 1742 aaKnown RBP6.9□□□□□ -1.3
NEDD9-204ENST00000448183 RREB1Q92766 1687 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 FER1L6Q2WGJ9 1857 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 CDRT15L2A8MXV6 281 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 SYNGR2O43760 224 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 VDAC1P21796 283 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 OPRK1P41145 380 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 LBHQ53QV2 105 aaPredicted RBP6.9□□□□□ -1.3
NEDD9-204ENST00000448183 SLC36A1Q7Z2H8 476 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.9□□□□□ -1.3
NEDD9-204ENST00000448183 LYG1Q8N1E2 194 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 OR1L4Q8NGR5 311 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 OR10C1Q96KK4 312 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 ZPBPQ9BS86 351 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 GSX1Q9H4S2 264 aaPredicted RBP6.9□□□□□ -1.3
NEDD9-204ENST00000448183 MANBALQ9NQG1 85 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 MIOXQ9UGB7 285 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 AMDHD2Q9Y303 409 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 PCM1Q15154 2024 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 ZNF785A8K8V0 405 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 NDUFB3O43676 98 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 DAOP14920 347 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 CA6P23280 308 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 SULT1A1P50225 295 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 RAB7AP51149 207 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 ZXDAP98168 799 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 KLF9Q13886 244 aaPredicted RBP6.9□□□□□ -1.3
NEDD9-204ENST00000448183 CEBPEQ15744 281 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 MICBQ29980 383 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 VWA1Q6PCB0 445 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 MOB3BQ86TA1 216 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 OR10A7Q8NGE5 316 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 ANAPC16Q96DE5 110 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 TRMT61AQ96FX7 289 aaKnown RBP6.9□□□□□ -1.3
NEDD9-204ENST00000448183 PACRGQ96M98 296 aaPredicted RBP6.9□□□□□ -1.3
NEDD9-204ENST00000448183 GNRHR2Q96P88 292 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 PRSS50Q9UI38 385 aa6.9□□□□□ -1.3
NEDD9-204ENST00000448183 OR5B21A6NL26 309 aa6.9□□□□□ -1.31
NEDD9-204ENST00000448183 OR4C45A6NMZ5 311 aa6.9□□□□□ -1.31
NEDD9-204ENST00000448183 ZNF253O75346 499 aa6.9□□□□□ -1.31
NEDD9-204ENST00000448183 IGF2P01344 180 aa6.9□□□□□ -1.31
NEDD9-204ENST00000448183 DYNLT3P51808 116 aa6.9□□□□□ -1.31
NEDD9-204ENST00000448183 LRRC10Q5BKY1 277 aa6.9□□□□□ -1.31
NEDD9-204ENST00000448183 Q6ZN92 141 aa6.9□□□□□ -1.31
NEDD9-204ENST00000448183 SPEM1Q8N4L4 309 aa6.9□□□□□ -1.31
NEDD9-204ENST00000448183 OR10G8Q8NGN5 311 aa6.9□□□□□ -1.31
NEDD9-204ENST00000448183 PTP4A1Q93096 173 aa6.9□□□□□ -1.31
NEDD9-204ENST00000448183 ATP5SQ99766 215 aa6.9□□□□□ -1.31
NEDD9-204ENST00000448183 RAB33BQ9H082 229 aa6.9□□□□□ -1.31
NEDD9-204ENST00000448183 KCNK15Q9H427 330 aa6.9□□□□□ -1.31
NEDD9-204ENST00000448183 SH2D2AQ9NP31 389 aa6.9□□□□□ -1.31
NEDD9-204ENST00000448183 TMEM9BQ9NQ34 198 aa6.9□□□□□ -1.31
NEDD9-204ENST00000448183 SIRT7Q9NRC8 400 aa6.9□□□□□ -1.31
NEDD9-204ENST00000448183 FKBP11Q9NYL4 201 aa6.9□□□□□ -1.31
NEDD9-204ENST00000448183 FRRS1LQ9P0K9 344 aa6.9□□□□□ -1.31
NEDD9-204ENST00000448183 A0A1B0GTQ1 180 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 C7orf66A4D0T2 115 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 MFNGO00587 321 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 SPRY3O43610 288 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 CIDEAO60543 219 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 MPZL1O95297 269 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 RBP4P02753 201 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 CRYBA1P05813 215 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 FAM87AP0C7U9 286 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 NAT2P11245 290 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 GABRG2P18507 467 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 RNPS1Q15287 305 aaKnown RBP6.89□□□□□ -1.31
NEDD9-204ENST00000448183 ZIC1Q15915 447 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 VASH2Q86V25 355 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 CXorf67Q86X51 503 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-204ENST00000448183 OR2Z1Q8NG97 314 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 OR13G1Q8NGZ3 307 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 TMEM191AQ9H0A3 160 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 OR2D2Q9H210 308 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 ESRP2Q9H6T0 727 aaKnown RBP6.89□□□□□ -1.31
NEDD9-204ENST00000448183 APC2O95996 2303 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 FAM186AA6NE01 2351 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 TRGV5A0A0B4J1U4 118 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 M0QZ24 198 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 CT62P0C5K7 136 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 RPS4Y1P22090 263 aaKnown RBP6.89□□□□□ -1.31
NEDD9-204ENST00000448183 CAMPP49913 170 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 GNB2P62879 340 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 ZNF547Q8IVP9 402 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 NPEPL1Q8NDH3 523 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 OR8B12Q8NGG6 310 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 SNX22Q96L94 193 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 MRGPRX3Q96LB0 322 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 MSL2Q9HCI7 577 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 GPR27Q9NS67 375 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 VAX2Q9UIW0 290 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 CCL27Q9Y4X3 112 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 DOCK2Q92608 1830 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 ZNF98A6NK75 572 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 M0QZK8 103 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 GGCTO75223 188 aaKnown RBP6.89□□□□□ -1.31
NEDD9-204ENST00000448183 NEURL1O76050 574 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 KIR2DS2P43631 304 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 ELOBQ15370 118 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms