RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 ZNF665Q9H7R5 613 aa11.02□□□□□ -0.65
TIMP1-204ENST00000445623 SEBOXQ9HB31 216 aaPredicted RBP11.02□□□□□ -0.65
TIMP1-204ENST00000445623 BATF3Q9NR55 127 aa11.02□□□□□ -0.65
TIMP1-204ENST00000445623 ABRACLQ9P1F3 81 aa11.02□□□□□ -0.65
TIMP1-204ENST00000445623 OR14J1Q9UGF5 321 aa11.02□□□□□ -0.65
TIMP1-204ENST00000445623 ST3GAL6Q9Y274 331 aa11.02□□□□□ -0.65
TIMP1-204ENST00000445623 PDZD2O15018 2839 aa11.02□□□□□ -0.65
TIMP1-204ENST00000445623 TMEM14DPA8MWL7 114 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 TMPRSS2O15393 492 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 ADAM20O43506 726 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 MPIG6BO95866 241 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 HAND1O96004 215 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 CHRM2P08172 466 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 SLC2A2P11168 524 aaPredicted RBP11.01□□□□□ -0.65
TIMP1-204ENST00000445623 RPS2P15880 293 aaKnown RBP11.01□□□□□ -0.65
TIMP1-204ENST00000445623 PRDX2P32119 198 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 RBM11P57052 281 aaKnown RBP11.01□□□□□ -0.65
TIMP1-204ENST00000445623 HOXA4Q00056 320 aaPredicted RBP11.01□□□□□ -0.65
TIMP1-204ENST00000445623 SPCS2Q15005 226 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 MPV17LQ2QL34 196 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 C2orf76Q3KRA6 126 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 ZNF561Q8N587 486 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 CHST4Q8NCG5 386 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 OR5T2Q8NGG2 359 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 ANGPTL6Q8NI99 470 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 PPP1R35Q8TAP8 253 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 ACOT12Q8WYK0 555 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 FAM46BQ96A09 425 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 DGCR14Q96DF8 476 aaKnown RBP11.01□□□□□ -0.65
TIMP1-204ENST00000445623 NEIL1Q96FI4 390 aaPredicted RBP11.01□□□□□ -0.65
TIMP1-204ENST00000445623 KAAG1Q9UBP8 84 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 FBLN5Q9UBX5 448 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 RAB22AQ9UL26 194 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 ETV7Q9Y603 341 aa11.01□□□□□ -0.65
TIMP1-204ENST00000445623 NOTCH2Q04721 2471 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 IGKV1D-17A0A075B6S4 117 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 TMEM272A0A1B0GTI8 110 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 FAM90A10PA6NDY2 464 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 FAM90A18PA6NE21 464 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 FAM90A16PA6NEW6 464 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 FAM90A20PA6NIJ5 464 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 FAM90A8PA6NJQ4 464 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 FAM90A7PA6NKC0 464 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 FAM90A22PA8MWA6 464 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 FAM90A12PA8MX19 464 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 FAM90A5PA8MXJ8 464 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 FAM90A23PA8MXZ1 464 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 SIGLEC5O15389 551 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 FAM90A15PP0C7V4 464 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 FAM90A13PP0C7W8 464 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 FAM90A14PP0C7W9 464 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 FAM90A24PP0C7X0 464 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 ZNF44P15621 663 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 ZNF182P17025 639 aaPredicted RBP11□□□□□ -0.65
TIMP1-204ENST00000445623 RAB6AP20340 208 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 NPY4RP50391 375 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 IL13RA1P78552 427 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 QRFPP83859 136 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 LOXL1Q08397 574 aaPredicted RBP11□□□□□ -0.65
TIMP1-204ENST00000445623 DYNC1I2Q13409 638 aaKnown RBP11□□□□□ -0.65
TIMP1-204ENST00000445623 IKZF1Q13422 519 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 LRRC10Q5BKY1 277 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 MZT2AQ6P582 158 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 ZNF788Q6ZQV5 615 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 TMEM104Q8NE00 496 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 WFDC11Q8NEX6 87 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 CLDND2Q8NHS1 167 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 LGALS14Q8TCE9 139 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 PTX4Q96A99 478 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 SDSLQ96GA7 329 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 CCL13Q99616 98 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 REG4Q9BYZ8 158 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 SELENOIQ9C0D9 397 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 BANF2Q9H503 90 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 PATZ1Q9HBE1 687 aaKnown RBP11□□□□□ -0.65
TIMP1-204ENST00000445623 SPACA1Q9HBV2 294 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 CCDC59Q9P031 241 aaKnown RBP11□□□□□ -0.65
TIMP1-204ENST00000445623 IL36RNQ9UBH0 155 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 ZNF222Q9UK12 451 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 CCDC168Q8NDH2 2452 aa11□□□□□ -0.65
TIMP1-204ENST00000445623 IGHV4-61A0A0C4DH41 118 aa10.99□□□□□ -0.65
TIMP1-204ENST00000445623 A0A1W2PP11 408 aa10.99□□□□□ -0.65
TIMP1-204ENST00000445623 METTL21EPA6NDL7 271 aa10.99□□□□□ -0.65
TIMP1-204ENST00000445623 RNF223E7ERA6 249 aa10.99□□□□□ -0.65
TIMP1-204ENST00000445623 DEGS1O15121 323 aa10.99□□□□□ -0.65
TIMP1-204ENST00000445623 NDUFB3O43676 98 aa10.99□□□□□ -0.65
TIMP1-204ENST00000445623 OR7C1O76099 320 aaPredicted RBP10.99□□□□□ -0.65
TIMP1-204ENST00000445623 IGHV2-5P01817 119 aa10.99□□□□□ -0.65
TIMP1-204ENST00000445623 SNRPBP14678 240 aaKnown RBP10.99□□□□□ -0.65
TIMP1-204ENST00000445623 DUSP1P28562 367 aa10.99□□□□□ -0.65
TIMP1-204ENST00000445623 PITPNBP48739 271 aa10.99□□□□□ -0.65
TIMP1-204ENST00000445623 RPS27AP62979 156 aaKnown RBP10.99□□□□□ -0.65
TIMP1-204ENST00000445623 SCN1BQ07699 218 aa10.99□□□□□ -0.65
TIMP1-204ENST00000445623 UNC119Q13432 240 aa10.99□□□□□ -0.65
TIMP1-204ENST00000445623 PIGYQ3MUY2 71 aa10.99□□□□□ -0.65
TIMP1-204ENST00000445623 ESCO2Q56NI9 601 aa10.99□□□□□ -0.65
TIMP1-204ENST00000445623 OR10K2Q6IF99 312 aa10.99□□□□□ -0.65
TIMP1-204ENST00000445623 ASCC1Q8N9N2 400 aaKnown RBP10.99□□□□□ -0.65
TIMP1-204ENST00000445623 Q96M66 194 aa10.99□□□□□ -0.65
TIMP1-204ENST00000445623 GAFA1Q96PS6 74 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms