RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 FAM234AQ9H0X4 552 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 C7orf69Q9H7B7 122 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 PLGRKTQ9HBL7 147 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 CTSZQ9UBR2 303 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 GHRLQ9UBU3 117 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 STUB1Q9UNE7 303 aa11.73□□□□□ -0.53
SSBP3-208ENST00000444533 HIVEP2P31629 2446 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 IGHV2-70DA0A0C4DH43 119 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 TRDV1A0A1B0GX56 115 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 A0A1W2PQ09 198 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 FUOMA2VDF0 154 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 H3BUI4 141 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 PIN1P1O15428 100 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 UBBP0CG47 229 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 GTF2F2P13984 249 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 ZNF44P15621 663 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 SERPINA2P20848 420 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 GABRR1P24046 479 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 ZFP36P26651 326 aaKnown RBP11.72□□□□□ -0.53
SSBP3-208ENST00000444533 COL10A1Q03692 680 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 SCN1BQ07699 218 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 BLMHQ13867 455 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 ZNF146Q15072 292 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 SLC22A6Q4U2R8 563 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 FAM27D1Q5T7N8 215 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 ELP2Q6IA86 826 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 ASPHD2Q6ICH7 369 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 ZNF841Q6ZN19 808 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 TMEM91Q6ZNR0 172 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 GDPD3Q7L5L3 318 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 OSR2Q8N2R0 312 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 CHST4Q8NCG5 386 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 ZNRF1Q8ND25 227 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 MUL1Q969V5 352 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 CST11Q9H112 138 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 CNTD2Q9H8S5 307 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 SEBOXQ9HB31 216 aaPredicted RBP11.72□□□□□ -0.53
SSBP3-208ENST00000444533 IL36GQ9NZH8 169 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 SF3B6Q9Y3B4 125 aaKnown RBP11.72□□□□□ -0.53
SSBP3-208ENST00000444533 AUP1Q9Y679 476 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 CSPG4Q6UVK1 2322 aa11.72□□□□□ -0.53
SSBP3-208ENST00000444533 TRBV23-1A0A0A0MS06 115 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 IGKV1-12A0A0C4DH73 117 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 KIAA1324LA8MWY0 1029 aaPredicted RBP11.71□□□□□ -0.53
SSBP3-208ENST00000444533 INAFM1C9JVW0 142 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 DEGS1O15121 323 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 CDRT1O95170 752 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 IGKV1D-12P01611 117 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 SFTPBP07988 381 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 CALCBP10092 127 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 CD36P16671 472 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 FAM120AOSQ5T036 256 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 METTL11BQ5VVY1 283 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 CD200R1LQ6Q8B3 271 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 GLIPR1L1Q6UWM5 242 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 LINC00596Q86U02 117 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 CD177Q8N6Q3 437 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 MRPS24Q96EL2 167 aaKnown RBP11.71□□□□□ -0.53
SSBP3-208ENST00000444533 SNX22Q96L94 193 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 DMRTB1Q96MA1 342 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 ZNF222Q9UK12 451 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 INSIG2Q9Y5U4 225 aa11.71□□□□□ -0.53
SSBP3-208ENST00000444533 TRAV1-2A0A0B4J238 106 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 KIR2DS1A0A191URI9 304 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 hCG_1809904A0A1W2PP81 198 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 A0A1W2PPE2 198 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 A0A1W2PR64 198 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 A0A1W2PRV1 198 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 MAGEA13PA6NCF6 341 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 F8VVB4 439 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 F8VWA3 439 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 TK1P04183 234 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 PPIAL4GP0DN37 164 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 HTR2CP28335 458 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 DUSP1P28562 367 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 CEBPDP49716 269 aaPredicted RBP11.7□□□□□ -0.54
SSBP3-208ENST00000444533 IL13RA2Q14627 380 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 DGUOKQ16854 277 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 C22orf42Q6IC83 251 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 ASCL4Q6XD76 172 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 OR6M1Q8NGM8 313 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 OR10K1Q8NGX5 313 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 NANPQ8TBE9 248 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 MRPS26Q9BYN8 205 aaKnown RBP11.7□□□□□ -0.54
SSBP3-208ENST00000444533 RPUSD1Q9UJJ7 312 aaKnown RBP11.7□□□□□ -0.54
SSBP3-208ENST00000444533 ST3GAL6Q9Y274 331 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 MAB21L2Q9Y586 359 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 V9GY05 133 aa11.7□□□□□ -0.54
SSBP3-208ENST00000444533 YLPM1P49750 1951 aaKnown RBP11.7□□□□□ -0.54
SSBP3-208ENST00000444533 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.7□□□□□ -0.542e-8■■■■□ 24
SSBP3-208ENST00000444533 LOC100506127A0A0U1RQW1 187 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 K7N7A8 449 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 SIRPB1O00241 398 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 CRTAPO75718 401 aaPredicted RBP11.69□□□□□ -0.54
SSBP3-208ENST00000444533 OR2H2O95918 312 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 SRD5A1P18405 259 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 FGF9P31371 208 aaPredicted RBP11.69□□□□□ -0.54
SSBP3-208ENST00000444533 GP2P55259 537 aaKnown RBP11.69□□□□□ -0.54
SSBP3-208ENST00000444533 EDDM3BP56851 147 aa11.69□□□□□ -0.54
SSBP3-208ENST00000444533 RPL31P62899 125 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms