RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 TCF7L1Q9HCS4 588 aa13.28□□□□□ -0.28
USP39-205ENST00000442708 LOC105371242A0A075B767 164 aa13.27□□□□□ -0.29
USP39-205ENST00000442708 PPIAL4CA0A0B4J2A2 164 aa13.27□□□□□ -0.29
USP39-205ENST00000442708 IGHV2-70DA0A0C4DH43 119 aa13.27□□□□□ -0.29
USP39-205ENST00000442708 CD37P11049 281 aa13.27□□□□□ -0.29
USP39-205ENST00000442708 NPY4RP50391 375 aa13.27□□□□□ -0.29
USP39-205ENST00000442708 COL10A1Q03692 680 aa13.27□□□□□ -0.29
USP39-205ENST00000442708 ZNF146Q15072 292 aa13.27□□□□□ -0.29
USP39-205ENST00000442708 DCAF12L2Q5VW00 463 aa13.27□□□□□ -0.29
USP39-205ENST00000442708 FAHD2BQ6P2I3 314 aaPredicted RBP13.27□□□□□ -0.29
USP39-205ENST00000442708 BTN2A1Q7KYR7 527 aa13.27□□□□□ -0.29
USP39-205ENST00000442708 JAGN1Q8N5M9 183 aa13.27□□□□□ -0.29
USP39-205ENST00000442708 Q8NFD4 153 aa13.27□□□□□ -0.29
USP39-205ENST00000442708 CPNE2Q96FN4 548 aaPredicted RBP13.27□□□□□ -0.29
USP39-205ENST00000442708 FAHD2AQ96GK7 314 aa13.27□□□□□ -0.29
USP39-205ENST00000442708 C1orf147Q96MC9 270 aaPredicted RBP13.27□□□□□ -0.29
USP39-205ENST00000442708 NR1H4Q96RI1 486 aaPredicted RBP13.27□□□□□ -0.29
USP39-205ENST00000442708 OR5V1Q9UGF6 321 aa13.27□□□□□ -0.29
USP39-205ENST00000442708 OPN4Q9UHM6 478 aa13.27□□□□□ -0.29
USP39-205ENST00000442708 ING4Q9UNL4 249 aa13.27□□□□□ -0.29
USP39-205ENST00000442708 GSTK1Q9Y2Q3 226 aa13.27□□□□□ -0.29
USP39-205ENST00000442708 INSIG2Q9Y5U4 225 aa13.27□□□□□ -0.29
USP39-205ENST00000442708 TRDV1A0A1B0GX56 115 aa13.26□□□□□ -0.29
USP39-205ENST00000442708 A0A1W2PP11 408 aa13.26□□□□□ -0.29
USP39-205ENST00000442708 TMEM82A0PJX8 343 aa13.26□□□□□ -0.29
USP39-205ENST00000442708 NDUFB3O43676 98 aa13.26□□□□□ -0.29
USP39-205ENST00000442708 ZNF737O75373 536 aa13.26□□□□□ -0.29
USP39-205ENST00000442708 HAND1O96004 215 aa13.26□□□□□ -0.29
USP39-205ENST00000442708 CALRP27797 417 aaKnown RBP13.26□□□□□ -0.29
USP39-205ENST00000442708 PDCD1Q15116 288 aa13.26□□□□□ -0.29
USP39-205ENST00000442708 FAM120AOSQ5T036 256 aa13.26□□□□□ -0.29
USP39-205ENST00000442708 ELP2Q6IA86 826 aa13.26□□□□□ -0.29
USP39-205ENST00000442708 CDH26Q8IXH8 852 aa13.26□□□□□ -0.29
USP39-205ENST00000442708 RAB40AQ8WXH6 277 aa13.26□□□□□ -0.29
USP39-205ENST00000442708 OR51E2Q9H255 320 aa13.26□□□□□ -0.29
USP39-205ENST00000442708 TMEM160Q9NX00 188 aa13.26□□□□□ -0.29
USP39-205ENST00000442708 ZNF581Q9P0T4 197 aa13.26□□□□□ -0.29
USP39-205ENST00000442708 SLC25A10Q9UBX3 287 aaPredicted RBP13.26□□□□□ -0.29
USP39-205ENST00000442708 MRPS28Q9Y2Q9 187 aaKnown RBP13.26□□□□□ -0.29
USP39-205ENST00000442708 NAV3Q8IVL0 2385 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 A0A0G2JMP0 313 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 A0A0X1KG70 313 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 MEGF11A6BM72 1044 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 ARL6IP5O75915 188 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 HTR3BO95264 441 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 JUNBP17275 347 aaPredicted RBP13.25□□□□□ -0.29
USP39-205ENST00000442708 CAV3P56539 151 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 FGF12P61328 243 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 RSU1Q15404 277 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 PIGYQ3MUY2 71 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 LRRC10Q5BKY1 277 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 C1orf100Q5SVJ3 147 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 C22orf42Q6IC83 251 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 Q6P435 159 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 C17orf107Q6ZR85 190 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 ZNF561Q8N587 486 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 NKAIN3Q8N8D7 197 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 PNLDC1Q8NA58 520 aaKnown RBP13.25□□□□□ -0.29
USP39-205ENST00000442708 TMEM185AQ8NFB2 350 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 OR4M2Q8NGB6 313 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 NUDT16L1Q9BRJ7 211 aaKnown RBP13.25□□□□□ -0.29
USP39-205ENST00000442708 METTL9Q9H1A3 318 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 SEBOXQ9HB31 216 aaPredicted RBP13.25□□□□□ -0.29
USP39-205ENST00000442708 RHOFQ9HBH0 211 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 TXNL4BQ9NX01 149 aaKnown RBP13.25□□□□□ -0.29
USP39-205ENST00000442708 IL36GQ9NZH8 169 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 RPUSD1Q9UJJ7 312 aaKnown RBP13.25□□□□□ -0.29
USP39-205ENST00000442708 DSCAML1Q8TD84 2053 aa13.25□□□□□ -0.29
USP39-205ENST00000442708 KIR2DS1A0A191URI9 304 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 K7N7A8 449 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 PSPNO60542 156 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 TK1P04183 234 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 CHRM2P08172 466 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 CD36P16671 472 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 NDUFB7P17568 137 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 GALP22466 123 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 GADD45AP24522 165 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 MTNR1BP49286 362 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 PAX8Q06710 450 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 SPIN3Q5JUX0 258 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 GLIPR1L1Q6UWM5 242 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 LY6G5BQ8NDX9 201 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 OR51T1Q8NGJ9 327 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 H1FXQ92522 213 aaKnown RBP13.24□□□□□ -0.29
USP39-205ENST00000442708 UQCC2Q9BRT2 126 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 DCTN5Q9BTE1 182 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 SHARPINQ9H0F6 387 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 RNF167Q9H6Y7 350 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 STUB1Q9UNE7 303 aa13.24□□□□□ -0.29
USP39-205ENST00000442708 AK6Q9Y3D8 172 aaKnown RBP13.24□□□□□ -0.29
USP39-205ENST00000442708 SIRPB1O00241 398 aa13.23□□□□□ -0.29
USP39-205ENST00000442708 CRLF1O75462 422 aa13.23□□□□□ -0.29
USP39-205ENST00000442708 OR2H2O95918 312 aa13.23□□□□□ -0.29
USP39-205ENST00000442708 SERPINA2P20848 420 aa13.23□□□□□ -0.29
USP39-205ENST00000442708 GATA3P23771 443 aa13.23□□□□□ -0.29
USP39-205ENST00000442708 FGF9P31371 208 aaPredicted RBP13.23□□□□□ -0.29
USP39-205ENST00000442708 CAPZA1P52907 286 aa13.23□□□□□ -0.29
USP39-205ENST00000442708 SCN1BQ07699 218 aa13.23□□□□□ -0.29
USP39-205ENST00000442708 SLC22A6Q4U2R8 563 aa13.23□□□□□ -0.29
USP39-205ENST00000442708 CD276Q5ZPR3 534 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms