RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 FAM110DQ8TAY7 271 aaPredicted RBP6.32□□□□□ -1.4
CD44-211ENST00000442151 ZNF596Q8TC21 504 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 EMG1Q92979 244 aaKnown RBP6.32□□□□□ -1.4
CD44-211ENST00000442151 KRTAP9-8Q9BYQ0 159 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 FGF23Q9GZV9 251 aaPredicted RBP6.32□□□□□ -1.4
CD44-211ENST00000442151 GAL3ST2Q9H3Q3 398 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 RIBC2Q9H4K1 309 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 C19orf12Q9NSK7 152 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 A0A0G2JK05 382 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 A0A1W2PQL4 384 aaPredicted RBP6.32□□□□□ -1.4
CD44-211ENST00000442151 DAPL1A0PJW8 107 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 FAM90A8PA6NJQ4 464 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 F2RL2O00254 374 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 MAGEB3O15480 346 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 ISG15P05161 165 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 HTR1AP08908 422 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 DBTP11182 482 aaKnown RBP6.32□□□□□ -1.4
CD44-211ENST00000442151 ATF1P18846 271 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 GABRR1P24046 479 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 COX7A1P24310 79 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 ERP29P30040 261 aaKnown RBP6.32□□□□□ -1.4
CD44-211ENST00000442151 CCR9P51686 369 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 PRRX1P54821 245 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 LY6EQ16553 131 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 SLC25A30Q5SVS4 291 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 ZFP1Q6P2D0 407 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 ANGPTL5Q86XS5 388 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 SAXO1Q8IYX7 474 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 FAM58AQ8N1B3 248 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 OR4F17Q8NGA8 305 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 OR4M1Q8NGD0 313 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 NDNFQ8TB73 568 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 TRMT10AQ8TBZ6 339 aaKnown RBP6.32□□□□□ -1.4
CD44-211ENST00000442151 OR4F4Q96R69 305 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 GABARAPL3Q9BY60 117 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 CHST5Q9GZS9 411 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 SEMA6AQ9H2E6 1030 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 ELL3Q9HB65 397 aaPredicted RBP6.32□□□□□ -1.4
CD44-211ENST00000442151 PCDHB16Q9NRJ7 776 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 GNG8Q9UK08 70 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 HHLA2Q9UM44 414 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 LINC00312Q9Y6C7 94 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 SESN1Q9Y6P5 492 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 TRGV10A0A0A0MS01 117 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 TOR1AO14656 332 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 KCNAB3O43448 404 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 HAND1O96004 215 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 CCDC159P0C7I6 412 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 IGHV1-8P0DP01 117 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 HTR1DP28221 377 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 EFNB2P52799 333 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 KPNB1Q14974 876 aaKnown RBP6.31□□□□□ -1.4
CD44-211ENST00000442151 GRK1Q15835 563 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 HCP5Q6MZN7 132 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 CCDC144NLQ6NUI1 221 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 FDX2Q6P4F2 183 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 SLC25A26Q70HW3 274 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 AMIGO2Q86SJ2 522 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 TRAPPC6BQ86SZ2 158 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 ACBD7Q8N6N7 88 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 ZNF676Q8N7Q3 588 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 CHST4Q8NCG5 386 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 OR5D14Q8NGL3 314 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 RORBQ92753 470 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 STMN2Q93045 179 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 TBX5Q99593 518 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 NKX3-1Q99801 234 aaPredicted RBP6.31□□□□□ -1.4
CD44-211ENST00000442151 CIB1Q99828 191 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 CLEC7AQ9BXN2 247 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 EXOSC4Q9NPD3 245 aaKnown RBP6.31□□□□□ -1.4
CD44-211ENST00000442151 INPP5EQ9NRR6 644 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 TAS2R3Q9NYW6 316 aa6.31□□□□□ -1.4
CD44-211ENST00000442151 TRBV2A0A0J9YWF9 115 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 MEGF11A6BM72 1044 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 LEUTXA8MZ59 168 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 OOSP1A8MZH6 123 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 MITFO75030 526 aaPredicted RBP6.3□□□□□ -1.4
CD44-211ENST00000442151 FBXO24O75426 580 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 ALX3O95076 343 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 MT-ND2P03891 347 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 OPN1MWP04001 364 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 OPN1MW2P0DN77 364 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 OPN1MW3P0DN78 364 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 MNDAP41218 407 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 SNRPGP62308 76 aaKnown RBP6.3□□□□□ -1.4
CD44-211ENST00000442151 SRSF4Q08170 494 aaKnown RBP6.3□□□□□ -1.4
CD44-211ENST00000442151 ZNF146Q15072 292 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 UBE2V2Q15819 145 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 KLHL22Q53GT1 634 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 ZNF626Q68DY1 528 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 NDUFA11Q86Y39 141 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 SERPINA12Q8IW75 414 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 OR4D6Q8NGJ1 314 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 OR2G2Q8NGZ5 317 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 TAF15Q92804 592 aaKnown RBP eCLIP6.3□□□□□ -1.4
CD44-211ENST00000442151 SLAMF9Q96A28 289 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 EME1Q96AY2 570 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 ZNF488Q96MN9 340 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 TTTY10Q9BZA0 68 aa6.3□□□□□ -1.4
CD44-211ENST00000442151 COMMD4Q9H0A8 199 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms