RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 SPIN3Q5JUX0 258 aa17.71■□□□□ 0.43
VPS13B-204ENST00000441350 HIST2H2BCQ6DN03 193 aa17.71■□□□□ 0.43
VPS13B-204ENST00000441350 LINC00596Q86U02 117 aa17.71■□□□□ 0.43
VPS13B-204ENST00000441350 IZUMO1Q8IYV9 350 aa17.71■□□□□ 0.43
VPS13B-204ENST00000441350 BOLLQ8N9W6 283 aaKnown RBP17.71■□□□□ 0.43
VPS13B-204ENST00000441350 YIPF5Q969M3 257 aa17.71■□□□□ 0.43
VPS13B-204ENST00000441350 PHF21AQ96BD5 680 aa17.71■□□□□ 0.43
VPS13B-204ENST00000441350 LIME1Q9H400 295 aa17.71■□□□□ 0.43
VPS13B-204ENST00000441350 ZNF581Q9P0T4 197 aa17.71■□□□□ 0.43
VPS13B-204ENST00000441350 PTPN13Q12923 2485 aa17.71■□□□□ 0.43
VPS13B-204ENST00000441350 CLDN25C9JDP6 229 aa17.7■□□□□ 0.42
VPS13B-204ENST00000441350 TPPPO94811 219 aa17.7■□□□□ 0.42
VPS13B-204ENST00000441350 KNG1P01042 644 aa17.7■□□□□ 0.42
VPS13B-204ENST00000441350 DUSP1P28562 367 aa17.7■□□□□ 0.42
VPS13B-204ENST00000441350 MNDAP41218 407 aa17.7■□□□□ 0.42
VPS13B-204ENST00000441350 NR4A2P43354 598 aa17.7■□□□□ 0.42
VPS13B-204ENST00000441350 MADCAM1Q13477 382 aa17.7■□□□□ 0.42
VPS13B-204ENST00000441350 MPV17LQ2QL34 196 aa17.7■□□□□ 0.42
VPS13B-204ENST00000441350 HFEQ30201 348 aa17.7■□□□□ 0.42
VPS13B-204ENST00000441350 TMEM69Q5SWH9 247 aa17.7■□□□□ 0.42
VPS13B-204ENST00000441350 FAM201AQ5SY85 155 aa17.7■□□□□ 0.42
VPS13B-204ENST00000441350 ZNF787Q6DD87 383 aa17.7■□□□□ 0.42
VPS13B-204ENST00000441350 C1orf87Q8N0U7 546 aa17.7■□□□□ 0.42
VPS13B-204ENST00000441350 RDH5Q92781 318 aa17.7■□□□□ 0.42
VPS13B-204ENST00000441350 DLL4Q9NR61 685 aa17.7■□□□□ 0.42
VPS13B-204ENST00000441350 A0A0G2JMP0 313 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 A0A0X1KG70 313 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 RP2O75695 350 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 LY6HO94772 140 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 F12P00748 615 aaPredicted RBP17.69■□□□□ 0.42
VPS13B-204ENST00000441350 HLA-DQB1P01920 261 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 PTBP1P26599 531 aaKnown RBP eCLIP17.69■□□□□ 0.422e-6■■■□□ 16.1
VPS13B-204ENST00000441350 BLVRBP30043 206 aaPredicted RBP17.69■□□□□ 0.42
VPS13B-204ENST00000441350 ZNF79Q15937 498 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 PLAC9Q5JTB6 97 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 Q6P435 159 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 FIP1L1Q6UN15 594 aaKnown RBP17.69■□□□□ 0.42
VPS13B-204ENST00000441350 FAM131AQ6UXB0 335 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 BAIAP2L2Q6UXY1 529 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 OR4M2Q8NGB6 313 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 CXorf56Q9H5V9 222 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 IFT22Q9H7X7 185 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 TRAV18A0A075B6X5 111 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 LYNX1G3V0Z9 82 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 NDUFS7O75251 213 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 LYNX1P0DP58 116 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 DAOP14920 347 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 CD80P33681 288 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 EFNA4P52798 201 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 TAS2R20P59543 309 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 KRTAP10-9P60411 292 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 PDCD1Q15116 288 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 TEX36Q5VZQ5 186 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 NRGNQ92686 78 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 RAB3CQ96E17 227 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 ABHD1Q96SE0 405 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 SEBOXQ9HB31 216 aaPredicted RBP17.69■□□□□ 0.42
VPS13B-204ENST00000441350 NLKQ9UBE8 527 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 RABL2AQ9UBK7 228 aaPredicted RBP17.69■□□□□ 0.42
VPS13B-204ENST00000441350 RABL2BQ9UNT1 228 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 PLEKHA6Q9Y2H5 1048 aa17.69■□□□□ 0.42
VPS13B-204ENST00000441350 OR7C1O76099 320 aaPredicted RBP17.68■□□□□ 0.42
VPS13B-204ENST00000441350 CHATP28329 748 aa17.68■□□□□ 0.42
VPS13B-204ENST00000441350 IKZF1Q13422 519 aa17.68■□□□□ 0.42
VPS13B-204ENST00000441350 IL18Q14116 193 aa17.68■□□□□ 0.42
VPS13B-204ENST00000441350 SFRP4Q6FHJ7 346 aaPredicted RBP17.68■□□□□ 0.42
VPS13B-204ENST00000441350 RTN4RL2Q86UN3 420 aa17.68■□□□□ 0.42
VPS13B-204ENST00000441350 C19orf18Q8NEA5 215 aa17.68■□□□□ 0.42
VPS13B-204ENST00000441350 ARHGAP5-AS1Q96IT6 56 aa17.68■□□□□ 0.42
VPS13B-204ENST00000441350 RCC2Q9P258 522 aaKnown RBP17.68■□□□□ 0.42
VPS13B-204ENST00000441350 DNAJB11Q9UBS4 358 aa17.68■□□□□ 0.42
VPS13B-204ENST00000441350 HSF4Q9ULV5 492 aa17.68■□□□□ 0.42
VPS13B-204ENST00000441350 MRPS7Q9Y2R9 242 aaKnown RBP17.68■□□□□ 0.42
VPS13B-204ENST00000441350 WIPI2Q9Y4P8 454 aa17.68■□□□□ 0.42
VPS13B-204ENST00000441350 SPG11Q96JI7 2443 aa17.68■□□□□ 0.42
VPS13B-204ENST00000441350 IGHV3OR15-7A0A075B7D8 119 aa17.67■□□□□ 0.42
VPS13B-204ENST00000441350 OOEPA6NGQ2 149 aa17.67■□□□□ 0.42
VPS13B-204ENST00000441350 OR2AT4A6NND4 320 aa17.67■□□□□ 0.42
VPS13B-204ENST00000441350 PSG2P11465 335 aa17.67■□□□□ 0.42
VPS13B-204ENST00000441350 MUC1P15941 1255 aaPredicted RBP17.67■□□□□ 0.42
VPS13B-204ENST00000441350 FUT3P21217 361 aa17.67■□□□□ 0.42
VPS13B-204ENST00000441350 PYHIN1Q6K0P9 492 aa17.67■□□□□ 0.42
VPS13B-204ENST00000441350 Q6ZTK2 550 aa17.67■□□□□ 0.42
VPS13B-204ENST00000441350 CHST4Q8NCG5 386 aa17.67■□□□□ 0.42
VPS13B-204ENST00000441350 WDR12Q9GZL7 423 aaKnown RBP17.67■□□□□ 0.42
VPS13B-204ENST00000441350 AUNIPQ9H7T9 357 aa17.67■□□□□ 0.42
VPS13B-204ENST00000441350 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.67■□□□□ 0.423e-11■■■■■ 41.3
VPS13B-204ENST00000441350 ZNF701Q9NV72 531 aaPredicted RBP17.67■□□□□ 0.42
VPS13B-204ENST00000441350 KCNK7Q9Y2U2 307 aa17.67■□□□□ 0.42
VPS13B-204ENST00000441350 IGKV1D-17A0A075B6S4 117 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 RFPL4AA6NLU0 287 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 RFPL4AL1F8VTS6 287 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 H3BUI4 141 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 LGALS8O00214 317 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 MFNGO00587 321 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 SH2D1BO14796 132 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 PDCD6O75340 191 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 ZNF205O95201 554 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 FSTL3O95633 263 aa17.66■□□□□ 0.42
VPS13B-204ENST00000441350 HAND1O96004 215 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms