RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 PSG4Q00888 419 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 FABP9Q0Z7S8 132 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 RIPPLY2Q5TAB7 128 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 BHLHE23Q8NDY6 225 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 TMEM104Q8NE00 496 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 EDARADDQ8WWZ3 215 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 PIGTQ969N2 578 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 EGLN1Q9GZT9 426 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 PARPBPQ9NWS1 579 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 LIPGQ9Y5X9 500 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 MYO7BQ6PIF6 2116 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 IGKV1-9A0A0C4DH69 117 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 CDRT15L2A8MXV6 281 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 C9JQL5 133 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 DUS4LO95620 317 aaKnown RBP12.3□□□□□ -0.44
LIMD1-202ENST00000440097 GNB3P16520 340 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 OTX1P32242 354 aaPredicted RBP12.3□□□□□ -0.44
LIMD1-202ENST00000440097 ZNF529Q6P280 563 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 TMEM178AQ8NBL3 297 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 FGFBP3Q8TAT2 258 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 PTX4Q96A99 478 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 NICN1Q9BSH3 213 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 RELNP78509 3460 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 A0A0A6YYH2 397 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 A0A1W2PP11 408 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 A6NJ64 397 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 RAB27BO00194 218 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 TXNL1O43396 289 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 SYNGR3O43761 229 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 NDUFS6O75380 124 aaKnown RBP12.3□□□□□ -0.44
LIMD1-202ENST00000440097 CD37P11049 281 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 FCGR2AP12318 317 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 CPT2P23786 658 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 S100PP25815 95 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 KISS1Q15726 138 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 REEP6Q96HR9 211 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 TMEM59Q9BXS4 323 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 FN3KRPQ9HA64 309 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 DBX1A6NMT0 343 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 PRR33A8MZF0 331 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 CD80P33681 288 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 HRH1P35367 487 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 LPAR6P43657 344 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 PMP22Q01453 160 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 FAM219AQ8IW50 185 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 ZNF100Q8IYN0 542 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 NAXEQ8NCW5 288 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 SGK3Q96BR1 496 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 NMES1Q9C002 83 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 OR2H1Q9GZK4 316 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 C12orf49Q9H741 205 aa12.3□□□□□ -0.44
LIMD1-202ENST00000440097 ZNF587BE7ETH6 402 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 LRP3O75074 770 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 IGHV2-70P01814 119 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 ARF1P84077 181 aaKnown RBP12.29□□□□□ -0.44
LIMD1-202ENST00000440097 UBE2V2Q15819 145 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 SEMA6DQ8NFY4 1073 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 KCNG3Q8TAE7 436 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 PP6455Q8WZ26 134 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 AQP3Q92482 292 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 APH1AQ96BI3 265 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 SMIM8Q96KF7 97 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 ZNF552Q9H707 407 aaPredicted RBP12.29□□□□□ -0.44
LIMD1-202ENST00000440097 ASCL3Q9NQ33 180 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 OR5AC2Q9NZP5 309 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 DOCK7Q96N67 2140 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 MED6O75586 246 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 PAX6P26367 422 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 THBS4P35443 961 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 HGFACQ04756 655 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 FAM76BQ5HYJ3 339 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 FAHD2BQ6P2I3 314 aaPredicted RBP12.29□□□□□ -0.44
LIMD1-202ENST00000440097 DHRS11Q6UWP2 260 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 ZFP62Q8NB50 900 aaPredicted RBP12.29□□□□□ -0.44
LIMD1-202ENST00000440097 FDCSPQ8NFU4 85 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 SAT2Q96F10 170 aaPredicted RBP12.29□□□□□ -0.44
LIMD1-202ENST00000440097 FAHD2AQ96GK7 314 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 SULT4A1Q9BR01 284 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 RPS10P5Q9NQ39 176 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 GPR173Q9NS66 373 aa12.29□□□□□ -0.44
LIMD1-202ENST00000440097 TRGV5A0A0B4J1U4 118 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 ZNHIT1O43257 154 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 RCC1P18754 421 aaPredicted RBP12.28□□□□□ -0.44
LIMD1-202ENST00000440097 SERPINA2P20848 420 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 CRYGSP22914 178 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 NOVA1P51513 510 aaKnown RBP12.28□□□□□ -0.44
LIMD1-202ENST00000440097 ZNF561Q8N587 486 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 MARCH1Q8TCQ1 289 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 HAS2Q92819 552 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 TMEM45BQ96B21 275 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 AKR1E2Q96JD6 320 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 CHST5Q9GZS9 411 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 WNT5BQ9H1J7 359 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 PIEZO1Q92508 2521 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 IGKV3D-15A0A087WSY6 115 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 FAM230AA0A1W2PPH8 454 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 OR6C6A6NF89 314 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 CDC14BO60729 498 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 SERPINA5P05154 406 aa12.28□□□□□ -0.44
LIMD1-202ENST00000440097 CD5P06127 495 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms