RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 C10orf91Q5T1B1 145 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 DHRS7BQ6IAN0 325 aaPredicted RBP11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 SLC25A26Q70HW3 274 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 GGNQ86UU5 652 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 HS3ST6Q96QI5 342 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 NAA60Q9H7X0 242 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 DEPPQ9NTK1 212 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 NBEAQ8NFP9 2946 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 MEX3AA1L020 520 aaKnown RBP11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 ZNF716A6NP11 495 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 NDUFA2O43678 99 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 F2RL1P55085 397 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 TMEM187Q14656 261 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 ARL6IP1Q15041 203 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 CNN3Q15417 329 aaKnown RBP11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 MIDNQ504T8 468 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 BTNL8Q6UX41 500 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 RAB11FIP2Q7L804 512 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 GLYATL2Q8WU03 294 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 SAT2Q96F10 170 aaPredicted RBP11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 KIRREL1Q96J84 757 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 WNT5BQ9H1J7 359 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 PINLYPA6NC86 204 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 JTBO76095 146 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 PRH1P02810 166 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 OMGP23515 440 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 FOLR3P41439 243 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 PMS2CLQ68D20 193 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 ESRP2Q9H6T0 727 aaKnown RBP11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 SH2D2AQ9NP31 389 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 ZFP57Q9NU63 452 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 TUBD1Q9UJT1 453 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 RCL1Q9Y2P8 373 aaKnown RBP11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 TAAR5O14804 337 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 RRP8O43159 456 aaKnown RBP11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 TSPAN15O95858 294 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 AADACP22760 399 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 RAB13P51153 203 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 PEA15Q15121 130 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 SPINK14Q6IE38 97 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 FBXW12Q6X9E4 464 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 CPEB3Q8NE35 698 aaKnown RBP11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 M1APQ8TC57 530 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 ISOC2Q96AB3 205 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 TP53RKQ96S44 253 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 OR2H1Q9GZK4 316 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 EIF5A2Q9GZV4 153 aaKnown RBP11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 PRDM6Q9NQX0 595 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 CRIM1Q9NZV1 1036 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 IL36RNQ9UBH0 155 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 NCOR1O75376 2440 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 GDF1P27539 372 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 EIF5AP63241 154 aaKnown RBP11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 SPIN3Q5JUX0 258 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 NSUN5P2Q63ZY6 315 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 ZNF611Q8N823 705 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 CLCC1Q96S66 551 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 RPS10P5Q9NQ39 176 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 ZDHHC8Q9ULC8 765 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 FREM1Q5H8C1 2179 aa11.72□□□□□ -0.53
HERPUD1-204ENST00000439977 DOCK7Q96N67 2140 aa11.71□□□□□ -0.53
HERPUD1-204ENST00000439977 H2AFB1P0C5Y9 115 aa11.71□□□□□ -0.53
HERPUD1-204ENST00000439977 EDN3P14138 238 aa11.71□□□□□ -0.53
HERPUD1-204ENST00000439977 TCN2P20062 427 aa11.71□□□□□ -0.53
HERPUD1-204ENST00000439977 FOXG1P55316 489 aaPredicted RBP11.71□□□□□ -0.53
HERPUD1-204ENST00000439977 CLINT1Q14677 625 aa11.71□□□□□ -0.53
HERPUD1-204ENST00000439977 MAGT1Q9H0U3 335 aa11.71□□□□□ -0.53
HERPUD1-204ENST00000439977 EDARQ9UNE0 448 aa11.71□□□□□ -0.53
HERPUD1-204ENST00000439977 SLC7A11Q9UPY5 501 aa11.71□□□□□ -0.53
HERPUD1-204ENST00000439977 ZNF175Q9Y473 711 aa11.71□□□□□ -0.53
HERPUD1-204ENST00000439977 TIMM10BQ9Y5J6 103 aa11.71□□□□□ -0.53
HERPUD1-204ENST00000439977 R4GN57 208 aa11.71□□□□□ -0.53
HERPUD1-204ENST00000439977 CFAP47Q6ZTR5 3102 aa11.71□□□□□ -0.53
HERPUD1-204ENST00000439977 SNRNP70P08621 437 aaKnown RBP11.71□□□□□ -0.54
HERPUD1-204ENST00000439977 MALLQ13021 153 aa11.71□□□□□ -0.54
HERPUD1-204ENST00000439977 ZNF528Q3MIS6 628 aa11.71□□□□□ -0.54
HERPUD1-204ENST00000439977 RTL6Q6ICC9 239 aa11.71□□□□□ -0.54
HERPUD1-204ENST00000439977 SLC35G3Q8N808 338 aa11.71□□□□□ -0.54
HERPUD1-204ENST00000439977 INTS12Q96CB8 462 aaKnown RBP11.71□□□□□ -0.54
HERPUD1-204ENST00000439977 C14orf79Q96F83 325 aa11.71□□□□□ -0.54
HERPUD1-204ENST00000439977 PAPOLGQ9BWT3 736 aaKnown RBP11.71□□□□□ -0.54
HERPUD1-204ENST00000439977 BCO1Q9HAY6 547 aa11.71□□□□□ -0.54
HERPUD1-204ENST00000439977 ZNF407Q9C0G0 2248 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 OR6C6A6NF89 314 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 CD5P06127 495 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 CST2P09228 141 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 LHFPL2Q6ZUX7 228 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 C10orf35Q96D05 121 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 IP6K3Q96PC2 410 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 OR51B6Q9H340 312 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 DECR2Q9NUI1 292 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 ZFHX4Q86UP3 3567 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 KNTC1P50748 2209 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 hCG_38984A0A1B0GV85 526 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 GJE1A6NN92 205 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 CELA3AP09093 270 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 CBR1P16152 277 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 ITGA3P26006 1051 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 CAMLGP49069 296 aa11.7□□□□□ -0.54
HERPUD1-204ENST00000439977 PPA1Q15181 289 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms