RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 KPTNQ9Y664 436 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 PCP4L1A6NKN8 68 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 ZNF850A8MQ14 1090 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 G3V3Y1 287 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 H7C1Q1 480 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 CST2P09228 141 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 FOLR2P14207 255 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 RAC1P63000 192 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 KRTAP27-1Q3LI81 207 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 HES3Q5TGS1 186 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 TMEM42Q69YG0 159 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 LHFPL2Q6ZUX7 228 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 PIP4P1Q86T03 277 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 OR1F12Q8NHA8 337 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 RTN4IP1Q8WWV3 396 aaPredicted RBP14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 BSCL2Q96G97 398 aaPredicted RBP14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 MARS2Q96GW9 593 aaKnown RBP14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 C18orf12Q96KH6 178 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 SF3B5Q9BWJ5 86 aaKnown RBP14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 SMCO4Q9NRQ5 59 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 FAM212BQ9NTI7 297 aaPredicted RBP14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 TIMM10BQ9Y5J6 103 aa14.22□□□□□ -0.13
CLCNKA-203ENST00000439316 GVINP1Q7Z2Y8 2422 aa14.21□□□□□ -0.13
CLCNKA-203ENST00000439316 DNPH1O43598 174 aa14.21□□□□□ -0.13
CLCNKA-203ENST00000439316 GPR137BO60478 399 aa14.21□□□□□ -0.13
CLCNKA-203ENST00000439316 SEC11BP0C7V7 166 aa14.21□□□□□ -0.13
CLCNKA-203ENST00000439316 RBP2P50120 134 aa14.21□□□□□ -0.13
CLCNKA-203ENST00000439316 SSR4P51571 173 aa14.21□□□□□ -0.13
CLCNKA-203ENST00000439316 UCP2P55851 309 aa14.21□□□□□ -0.13
CLCNKA-203ENST00000439316 SP6Q3SY56 376 aa14.21□□□□□ -0.13
CLCNKA-203ENST00000439316 ABCA11PQ4W5N1 156 aa14.21□□□□□ -0.13
CLCNKA-203ENST00000439316 ZNF774Q6NX45 483 aa14.21□□□□□ -0.13
CLCNKA-203ENST00000439316 COMMD1Q8N668 190 aa14.21□□□□□ -0.13
CLCNKA-203ENST00000439316 ZPBPQ9BS86 351 aa14.21□□□□□ -0.13
CLCNKA-203ENST00000439316 OR6C6A6NF89 314 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 HMGN3Q15651 99 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 LIAT1Q6ZQX7 453 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 TIPARPQ7Z3E1 657 aaKnown RBP14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 OR10AD1Q8NGE0 317 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 M1APQ8TC57 530 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 DYRK2Q92630 601 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 BORCS8Q96FH0 119 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 JSRP1Q96MG2 331 aaPredicted RBP14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 GINS3Q9BRX5 216 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 DDA1Q9BW61 102 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 WFDC1Q9HC57 220 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 TMEM38BQ9NVV0 291 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 IL36GQ9NZH8 169 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 RTTNQ86VV8 2226 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 CELSR3Q9NYQ7 3312 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 IGKV1-12A0A0C4DH73 117 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 C9orf172C9J069 976 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 ZNF205O95201 554 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 IGKV1D-12P01611 117 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 DANCRP0C864 163 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 SNCAP37840 140 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 P2RY1P47900 373 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 KCNJ3P48549 501 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 CTAG1AP78358 180 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 GPR157Q5UAW9 335 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 SLC22A25Q6T423 547 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 LYZL2Q7Z4W2 148 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 C15orf54Q8N8G6 183 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 DEFB124Q8NES8 71 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 OR2Y1Q8NGV0 311 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 SECTM1Q8WVN6 248 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 MSI2Q96DH6 328 aaKnown RBP14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 AKR1E2Q96JD6 320 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 SCRT1Q9BWW7 348 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 EGLN1Q9GZT9 426 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 BCO1Q9HAY6 547 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 SLC2A9Q9NRM0 540 aa14.2□□□□□ -0.14
CLCNKA-203ENST00000439316 FAM186AA6NE01 2351 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 CCDC187A0A096LP49 1063 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 BORCS7-ASMTA0A0B4J1R7 106 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 GJE1A6NN92 205 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 MASP2O00187 686 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 GEMIN2O14893 280 aaKnown RBP14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 TSPAN15O95858 294 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 LCATP04180 440 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 IFNA4P05014 189 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 UCP3P55916 312 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 B3GALT5-AS1P59052 145 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 FXYD4P59646 89 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 PIGYQ3MUY2 71 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 MIDNQ504T8 468 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 C6orf15Q6UXA7 325 aaPredicted RBP14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 ZNF100Q8IYN0 542 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 OSR2Q8N2R0 312 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 KDF1Q8NAX2 398 aaPredicted RBP14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 MOB3AQ96BX8 217 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 C12orf57Q99622 126 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 ZDHHC8Q9ULC8 765 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 HS3ST3B1Q9Y662 390 aa14.19□□□□□ -0.14
CLCNKA-203ENST00000439316 CBR3O75828 277 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 DIRAS3O95661 229 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 NRASP01111 189 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 DUSP1P28562 367 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 PRSS12P56730 875 aa14.18□□□□□ -0.14
CLCNKA-203ENST00000439316 RAC3P60763 192 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms