RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 TBC1D28Q2M2D7 210 aa13.33□□□□□ -0.28
TSC2-206ENST00000439117 RGS7BPQ6MZT1 257 aaPredicted RBP13.33□□□□□ -0.28
TSC2-206ENST00000439117 CARFQ8N187 725 aa13.33□□□□□ -0.28
TSC2-206ENST00000439117 MRGPRX4Q96LA9 322 aa13.33□□□□□ -0.28
TSC2-206ENST00000439117 FUT9Q9Y231 359 aa13.33□□□□□ -0.28
TSC2-206ENST00000439117 DEFA4P12838 97 aa13.33□□□□□ -0.28
TSC2-206ENST00000439117 CDC34P49427 236 aaPredicted RBP13.33□□□□□ -0.28
TSC2-206ENST00000439117 RAE1P78406 368 aaKnown RBP13.33□□□□□ -0.28
TSC2-206ENST00000439117 Q1RN00 199 aa13.33□□□□□ -0.28
TSC2-206ENST00000439117 CLEC18BQ6UXF7 455 aa13.33□□□□□ -0.28
TSC2-206ENST00000439117 TSEN54Q7Z6J9 526 aaKnown RBP13.33□□□□□ -0.28
TSC2-206ENST00000439117 OR10G8Q8NGN5 311 aa13.33□□□□□ -0.28
TSC2-206ENST00000439117 OR1N1Q8NGS0 311 aa13.33□□□□□ -0.28
TSC2-206ENST00000439117 PAM16Q9Y3D7 125 aa13.33□□□□□ -0.28
TSC2-206ENST00000439117 GRPP07492 148 aa13.33□□□□□ -0.28
TSC2-206ENST00000439117 COMMD5Q9GZQ3 224 aa13.33□□□□□ -0.28
TSC2-206ENST00000439117 DEFB127Q9H1M4 99 aa13.33□□□□□ -0.28
TSC2-206ENST00000439117 SLC45A2Q9UMX9 530 aa13.33□□□□□ -0.28
TSC2-206ENST00000439117 ATG2BQ96BY7 2078 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 KIF13BQ9NQT8 1826 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 EDN3P14138 238 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 SELEP16581 610 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 EIF4EBP2Q13542 120 aaPredicted RBP13.32□□□□□ -0.28
TSC2-206ENST00000439117 ZNF385CQ66K41 422 aaPredicted RBP13.32□□□□□ -0.28
TSC2-206ENST00000439117 DHRS7BQ6IAN0 325 aaPredicted RBP13.32□□□□□ -0.28
TSC2-206ENST00000439117 LINC00469Q8N7U9 141 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 OR1L3Q8NH93 324 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 TBX15Q96SF7 602 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 VN1R1Q9GZP7 353 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 WDR61Q9GZS3 305 aaKnown RBP13.32□□□□□ -0.28
TSC2-206ENST00000439117 KCNE3Q9Y6H6 103 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 TRBV5-3A0A0A0MS03 114 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 SIAH2O43255 324 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 BATF2Q8N1L9 274 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 MSL2Q9HCI7 577 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 C3orf85A0A1B0GTC6 90 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 MED19A0JLT2 244 aaPredicted RBP13.32□□□□□ -0.28
TSC2-206ENST00000439117 IGHV3-9P01782 118 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 CELA2BP08218 269 aaPredicted RBP13.32□□□□□ -0.28
TSC2-206ENST00000439117 HLA-GP17693 338 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 FAM3BP58499 235 aaPredicted RBP13.32□□□□□ -0.28
TSC2-206ENST00000439117 SPEM2Q0P670 501 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.32□□□□□ -0.28
TSC2-206ENST00000439117 SPACA9Q96E40 222 aaPredicted RBP13.32□□□□□ -0.28
TSC2-206ENST00000439117 ZNF835Q9Y2P0 537 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 R4GN57 208 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 TRPM6Q9BX84 2022 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 ARFGEF1Q9Y6D6 1849 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 TERTO14746 1132 aaKnown RBP13.32□□□□□ -0.28
TSC2-206ENST00000439117 PPOXP50336 477 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 DHRS13Q6UX07 377 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 OR4D9Q8NGE8 314 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 OR10G4Q8NGN3 311 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 OR10G9Q8NGN4 311 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 OR10G7Q8NGN6 311 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 S1PR3Q99500 378 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 MMP25Q9NPA2 562 aa13.32□□□□□ -0.28
TSC2-206ENST00000439117 COX7A2P2O60397 106 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 FAHP16930 419 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 RTL8BQ17RB0 113 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 ZNF660Q6AZW8 331 aaPredicted RBP13.31□□□□□ -0.28
TSC2-206ENST00000439117 MRGPRGQ86SM5 289 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 ATP5SQ99766 215 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 C20orf141Q9NUB4 165 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 SLC2A8Q9NY64 477 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 OR1A1Q9P1Q5 309 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 M0R2Z0 102 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 MT-CO3P00414 261 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 CLEC3BP05452 202 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 OR5AC1P0C628 307 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 PAFAH1B2P68402 229 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 HIST3H3Q16695 136 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 KHDC3LQ587J8 217 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 FBXL14Q8N1E6 418 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 PRSS3P2Q8NHM4 247 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 RPS4Y2Q8TD47 263 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 SARAFQ96BY9 339 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 MS4A3Q96HJ5 214 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 NKX6-3A6NJ46 265 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 LANCL1O43813 399 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 SOX15O60248 233 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 SUMO3P55854 103 aaPredicted RBP13.31□□□□□ -0.28
TSC2-206ENST00000439117 TMEM267Q0VDI3 215 aaPredicted RBP13.31□□□□□ -0.28
TSC2-206ENST00000439117 CLN3Q13286 438 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 DEFB109BQ30KR1 87 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 TMEM251Q8N6I4 163 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 DTD1Q8TEA8 209 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 ADAT1Q9BUB4 502 aaKnown RBP13.31□□□□□ -0.28
TSC2-206ENST00000439117 CA10Q9NS85 328 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.31□□□□□ -0.28
TSC2-206ENST00000439117 TRIP11Q15643 1979 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 SIGLEC14Q08ET2 396 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 DMWDQ09019 674 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 KISS1Q15726 138 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 FAM219BQ5XKK7 198 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 VN1R4Q7Z5H5 301 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 ZDHHC23Q8IYP9 409 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 C11orf40Q8WZ69 217 aa13.31□□□□□ -0.28
TSC2-206ENST00000439117 MRPS18AQ9NVS2 196 aaKnown RBP13.31□□□□□ -0.28
TSC2-206ENST00000439117 SIRPB1O00241 398 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms