RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 FOXF1Q12946 379 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 HIKESHIQ53FT3 197 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 OR5T1Q8NG75 326 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 PGAM5Q96HS1 289 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 TP53RKQ96S44 253 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 PTPRSQ13332 1948 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 TMEM150CB9EJG8 249 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 ST8SIA3O43173 380 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 FOLR1P15328 257 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 HNRNPA2B1P22626 353 aaKnown RBP11.68□□□□□ -0.54
ACTN1-204ENST00000438964 IGLV3-21P80748 117 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-204ENST00000438964 ZNF154Q13106 437 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 DNM1P34Q6PK57 102 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 CRIP3Q6Q6R5 217 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 H1FNTQ75WM6 255 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-204ENST00000438964 GRINAQ7Z429 371 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 SLC2A9Q9NRM0 540 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 GLRX2Q9NS18 164 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 CBLN4Q9NTU7 201 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 TLCD2A6NGC4 264 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 C3orf80F5H4A9 247 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 GALR2O43603 387 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-204ENST00000438964 MYF5P13349 255 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 NTSR1P30989 418 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 HSD17B7P56937 341 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 TMEM187Q14656 261 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 P2RY6Q15077 328 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 SLC22A25Q6T423 547 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 LYZL4Q96KX0 146 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 SLC46A1Q96NT5 459 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 KLHL13Q9P2N7 655 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 OR14J1Q9UGF5 321 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 TMEM131Q92545 1883 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 A6NIZ1 184 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 RAP1BP61224 184 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 GABREP78334 506 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 HSD11B2P80365 405 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 PIGYQ3MUY2 71 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 SPIN3Q5JUX0 258 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 CALHM2Q9HA72 323 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 SERINC1Q9NRX5 453 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 ANXA10Q9UJ72 324 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 PIGLQ9Y2B2 252 aa11.67□□□□□ -0.54
ACTN1-204ENST00000438964 A6NNC1 897 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 ALG1L2C9J202 215 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 HSPB6O14558 160 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 PTBP3O95758 552 aaKnown RBP11.66□□□□□ -0.54
ACTN1-204ENST00000438964 GZMBP10144 247 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 CD33P20138 364 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 DYNLT3P51808 116 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 ERVS71-1P61550 626 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 PPA1Q15181 289 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 TVP23CQ96ET8 276 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 MRGPRX1Q96LB2 322 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 NAA60Q9H7X0 242 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 WDFY4Q6ZS81 3184 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 FRG2CA6NGY1 282 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 SCGNO76038 276 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 UCP2P55851 309 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 GNMTQ14749 295 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 FAM69BQ5VUD6 431 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 ABCA7Q8IZY2 2146 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 OR2C3Q8N628 320 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 GPBAR1Q8TDU6 330 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 CPNE4Q96A23 557 aaPredicted RBP11.66□□□□□ -0.54
ACTN1-204ENST00000438964 ARV1Q9H2C2 271 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 VSIRQ9H7M9 311 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 ZNF665Q9H7R5 613 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 ASPMQ8IZT6 3477 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 DOCK7Q96N67 2140 aa11.66□□□□□ -0.54
ACTN1-204ENST00000438964 A0A1B0GUS0 222 aa11.65□□□□□ -0.54
ACTN1-204ENST00000438964 EFNA2O43921 213 aa11.65□□□□□ -0.54
ACTN1-204ENST00000438964 OR4A8P0C604 315 aa11.65□□□□□ -0.54
ACTN1-204ENST00000438964 COX5BP10606 129 aa11.65□□□□□ -0.54
ACTN1-204ENST00000438964 SLC38A9Q8NBW4 561 aa11.65□□□□□ -0.54
ACTN1-204ENST00000438964 CAPNS2Q96L46 248 aa11.65□□□□□ -0.54
ACTN1-204ENST00000438964 CCNL2Q96S94 520 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-204ENST00000438964 ANAPC10Q9UM13 185 aa11.65□□□□□ -0.54
ACTN1-204ENST00000438964 OR2J2O76002 312 aa11.65□□□□□ -0.54
ACTN1-204ENST00000438964 TNFP01375 233 aa11.65□□□□□ -0.54
ACTN1-204ENST00000438964 CTSDP07339 412 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-204ENST00000438964 ZNF43P17038 809 aa11.65□□□□□ -0.54
ACTN1-204ENST00000438964 BTF3P20290 206 aaKnown RBP11.65□□□□□ -0.54
ACTN1-204ENST00000438964 CD200P41217 278 aa11.65□□□□□ -0.54
ACTN1-204ENST00000438964 ALDH3B1P43353 468 aa11.65□□□□□ -0.54
ACTN1-204ENST00000438964 DAP3P51398 398 aaKnown RBP11.65□□□□□ -0.54
ACTN1-204ENST00000438964 MLF1P58340 268 aa11.65□□□□□ -0.54
ACTN1-204ENST00000438964 SMAD4Q13485 552 aaKnown RBP11.65□□□□□ -0.54
ACTN1-204ENST00000438964 RTP5Q14D33 572 aa11.65□□□□□ -0.54
ACTN1-204ENST00000438964 LGI3Q8N145 548 aa11.65□□□□□ -0.54
ACTN1-204ENST00000438964 COMMD1Q8N668 190 aa11.65□□□□□ -0.54
ACTN1-204ENST00000438964 OR14L1PQ8NHC6 308 aa11.65□□□□□ -0.54
ACTN1-204ENST00000438964 BOD1Q96IK1 185 aa11.65□□□□□ -0.54
ACTN1-204ENST00000438964 IGHV3-15A0A0B4J1V0 119 aa11.65□□□□□ -0.55
ACTN1-204ENST00000438964 TSPAN2O60636 221 aa11.65□□□□□ -0.55
ACTN1-204ENST00000438964 TMEM50AO95807 157 aa11.65□□□□□ -0.55
ACTN1-204ENST00000438964 IFNA10P01566 189 aa11.65□□□□□ -0.55
ACTN1-204ENST00000438964 AMBPP02760 352 aa11.65□□□□□ -0.55
ACTN1-204ENST00000438964 GLIPR1P48060 266 aa11.65□□□□□ -0.55
ACTN1-204ENST00000438964 MRPS34P82930 218 aaKnown RBP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms