RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 NPIPB7O75200 414 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 RENP00797 406 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 IFNA10P01566 189 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 IGHV4-39P01824 125 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 IGHV4-59P01825 116 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 PFN1P07737 140 aaKnown RBP2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 FCGR3AP08637 254 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 IL3P08700 152 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 MRPL3P09001 348 aaKnown RBP2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 SLC35G6P0C7Q6 338 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 GKN3PP0CG01 181 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 SMIM6P0DI80 62 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 SULT1A3P0DMM9 295 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 SULT1A4P0DMN0 295 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 CXCL3P19876 107 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 PAX6P26367 422 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 MARK3P27448 753 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 CD34P28906 385 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 FCGR2CP31995 323 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 CEACAM8P31997 349 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 MYCNOSP40205 109 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 CTRLP40313 264 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 GPR6P46095 362 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 PSMD8P48556 350 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 MFAP2P55001 183 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 CKS1BP61024 79 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 GTF2BQ00403 316 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 CDK5Q00535 292 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 MPPED2Q15777 294 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 ECSCRQ19T08 205 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 PLPPR5Q32ZL2 321 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 TEX36Q5VZQ5 186 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 REP15Q6BDI9 236 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 TOMM20LQ6UXN7 152 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 ALKAL1Q6UXT8 129 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 SPNS3Q6ZMD2 512 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 NEGR1Q7Z3B1 354 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 MRPL55Q7Z7F7 128 aaKnown RBP2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 SAMD12Q8N8I0 201 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 COX18Q8N8Q8 333 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 ZNF114Q8NC26 417 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR4P4Q8NGL7 312 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 MCFD2Q8NI22 146 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 DNAJC9Q8WXX5 260 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 GHSRQ92847 366 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 NEUROG1Q92886 237 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 TCEAL3Q969E4 200 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 DIRAS2Q96HU8 199 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 EBF4Q9BQW3 602 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 MROQ9BYG7 248 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 WDR13Q9H1Z4 485 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 FAM96AQ9H5X1 160 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 ISG20L2Q9H9L3 353 aaKnown RBP2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 EXOSC3Q9NQT5 275 aaKnown RBP2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 SPANXA1Q9NS26 97 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 ZNF223Q9UK11 482 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 WSB1Q9Y6I7 421 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 ARAP1Q96P48 1450 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 KIF21AQ7Z4S6 1674 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 UNC79Q9P2D8 2635 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 SAMD9Q5K651 1589 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 CEP162Q5TB80 1403 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 IGHV1OR21-1A0A087WYE8 117 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 UQCRHLA0A096LP55 91 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 IGLV1-36A0A0B4J1U3 117 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 TRAV8-4A0A0B4J246 113 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 IGKV1D-13A0A0B4J2D9 117 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 A0A1W2PRE2 83 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 MAP1LC3B2A6NCE7 125 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 RBMY1BA6NDE4 496 aaKnown RBP2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 RBMY1EA6NEQ0 496 aaKnown RBP2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 C5orf58C9J3I9 102 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 INAFM1C9JVW0 142 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 J3QT63 122 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 K7ENP7 123 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 FAAHO00519 579 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 CYB5BO43169 146 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 EDIL3O43854 480 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 CRLF1O75462 422 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 POP7O75817 140 aaKnown RBP2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 PMS2P2O95744 297 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 SEMA4FO95754 770 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 AIFM1O95831 613 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 PAK4O96013 591 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 MOSP00540 346 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 LALBAP00709 142 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 P01737 135 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 UQCRHP07919 91 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 RBMY1DP0C7P1 496 aaKnown RBP2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 RBMY1A1P0DJD3 496 aaKnown RBP2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 IGKV1-13P0DP09 117 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 CD1DP15813 335 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 CXCL2P19875 107 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 AK4P27144 223 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 MIPP30301 263 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 CD200P41217 278 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 KIR2DS2P43631 304 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 RFX2P48378 723 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 RIPPLY3P57055 190 aa2.87□□□□□ -1.95
HMGB1P12-201ENST00000438594 GNG2P59768 71 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms