RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 FAHD2BQ6P2I3 314 aaPredicted RBP13.39□□□□□ -0.27
SNRPB-202ENST00000438552 CD200R1LQ6Q8B3 271 aa13.39□□□□□ -0.27
SNRPB-202ENST00000438552 FIP1L1Q6UN15 594 aaKnown RBP13.39□□□□□ -0.27
SNRPB-202ENST00000438552 BTN2A1Q7KYR7 527 aa13.39□□□□□ -0.27
SNRPB-202ENST00000438552 H1FXQ92522 213 aaKnown RBP13.39□□□□□ -0.27
SNRPB-202ENST00000438552 PHYHIPQ92561 330 aa13.39□□□□□ -0.27
SNRPB-202ENST00000438552 DACT3Q96B18 629 aaPredicted RBP13.39□□□□□ -0.27
SNRPB-202ENST00000438552 FAHD2AQ96GK7 314 aa13.39□□□□□ -0.27
SNRPB-202ENST00000438552 TMPRSS13Q9BYE2 586 aa13.39□□□□□ -0.27
SNRPB-202ENST00000438552 CNTD2Q9H8S5 307 aa13.39□□□□□ -0.27
SNRPB-202ENST00000438552 TMEM160Q9NX00 188 aa13.39□□□□□ -0.27
SNRPB-202ENST00000438552 ING4Q9UNL4 249 aa13.39□□□□□ -0.27
SNRPB-202ENST00000438552 GSTK1Q9Y2Q3 226 aa13.39□□□□□ -0.27
SNRPB-202ENST00000438552 MRPS28Q9Y2Q9 187 aaKnown RBP13.39□□□□□ -0.27
SNRPB-202ENST00000438552 SVEP1Q4LDE5 3571 aa13.39□□□□□ -0.27
SNRPB-202ENST00000438552 PPIAL4CA0A0B4J2A2 164 aa13.38□□□□□ -0.27
SNRPB-202ENST00000438552 HAND1O96004 215 aa13.38□□□□□ -0.27
SNRPB-202ENST00000438552 NDUFB7P17568 137 aa13.38□□□□□ -0.27
SNRPB-202ENST00000438552 SRMP19623 302 aa13.38□□□□□ -0.27
SNRPB-202ENST00000438552 COL10A1Q03692 680 aa13.38□□□□□ -0.27
SNRPB-202ENST00000438552 SPIN3Q5JUX0 258 aa13.38□□□□□ -0.27
SNRPB-202ENST00000438552 LYPD6Q86Y78 171 aa13.38□□□□□ -0.27
SNRPB-202ENST00000438552 ZNF561Q8N587 486 aa13.38□□□□□ -0.27
SNRPB-202ENST00000438552 ASCC1Q8N9N2 400 aaKnown RBP13.38□□□□□ -0.27
SNRPB-202ENST00000438552 OR4D6Q8NGJ1 314 aa13.38□□□□□ -0.27
SNRPB-202ENST00000438552 NUDT16L1Q9BRJ7 211 aaKnown RBP13.38□□□□□ -0.27
SNRPB-202ENST00000438552 SLITRK2Q9H156 845 aa13.38□□□□□ -0.27
SNRPB-202ENST00000438552 RHOFQ9HBH0 211 aa13.38□□□□□ -0.27
SNRPB-202ENST00000438552 INSIG2Q9Y5U4 225 aa13.38□□□□□ -0.27
SNRPB-202ENST00000438552 ENSAO43768 121 aaKnown RBP13.37□□□□□ -0.27
SNRPB-202ENST00000438552 HTR3BO95264 441 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 AVPP01185 164 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 SMIM18P0DKX4 95 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 SERPINA2P20848 420 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 GATA3P23771 443 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 MTNR1BP49286 362 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 CAV3P56539 151 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 FGF12P61328 243 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 ZNF146Q15072 292 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 CD276Q5ZPR3 534 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 AWAT2Q6E213 333 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 C22orf42Q6IC83 251 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 ASCL4Q6XD76 172 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 RAB40AQ8WXH6 277 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 S100A13Q99584 98 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 GFI1Q99684 422 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 SHARPINQ9H0F6 387 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 METTL9Q9H1A3 318 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 VCX3AQ9NNX9 186 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 EXOSC4Q9NPD3 245 aaKnown RBP13.37□□□□□ -0.27
SNRPB-202ENST00000438552 IL36GQ9NZH8 169 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 RPUSD1Q9UJJ7 312 aaKnown RBP13.37□□□□□ -0.27
SNRPB-202ENST00000438552 NF1P21359 2839 aa13.37□□□□□ -0.27
SNRPB-202ENST00000438552 TRDV1A0A1B0GX56 115 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 A0A1W2PP11 408 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 MEGF11A6BM72 1044 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 TRIM64CA6NLI5 447 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 J3QLI3 93 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 SIRPB1O00241 398 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 HNF1AP20823 631 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 PDCD1Q15116 288 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 PIGYQ3MUY2 71 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 SLC22A6Q4U2R8 563 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 ELP2Q6IA86 826 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 GLIPR1L1Q6UWM5 242 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 BTNL3Q6UXE8 466 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 C1orf229Q6ZS94 237 aaPredicted RBP13.36□□□□□ -0.27
SNRPB-202ENST00000438552 CDH26Q8IXH8 852 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 UQCC2Q9BRT2 126 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 DCTN5Q9BTE1 182 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 MRI1Q9BV20 369 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 CHST6Q9GZX3 395 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 OR51E2Q9H255 320 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 C7orf69Q9H7B7 122 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 OPN4Q9UHM6 478 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 CDC42EP3Q9UKI2 254 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 STUB1Q9UNE7 303 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 DSCAML1Q8TD84 2053 aa13.36□□□□□ -0.27
SNRPB-202ENST00000438552 NIPBLQ6KC79 2804 aaeCLIP13.35□□□□□ -0.272e-6■□□□□ 9.7
SNRPB-202ENST00000438552 SHISA3A0PJX4 238 aa13.35□□□□□ -0.27
SNRPB-202ENST00000438552 TMEM82A0PJX8 343 aa13.35□□□□□ -0.27
SNRPB-202ENST00000438552 ZNF737O75373 536 aa13.35□□□□□ -0.27
SNRPB-202ENST00000438552 ECDO95905 644 aaPredicted RBP13.35□□□□□ -0.27
SNRPB-202ENST00000438552 OR2H2O95918 312 aa13.35□□□□□ -0.27
SNRPB-202ENST00000438552 CSTBP04080 98 aaKnown RBP13.35□□□□□ -0.27
SNRPB-202ENST00000438552 TK1P04183 234 aa13.35□□□□□ -0.27
SNRPB-202ENST00000438552 CHRM2P08172 466 aa13.35□□□□□ -0.27
SNRPB-202ENST00000438552 ZNF44P15621 663 aa13.35□□□□□ -0.27
SNRPB-202ENST00000438552 CD36P16671 472 aa13.35□□□□□ -0.27
SNRPB-202ENST00000438552 GALP22466 123 aa13.35□□□□□ -0.27
SNRPB-202ENST00000438552 GABRR1P24046 479 aa13.35□□□□□ -0.27
SNRPB-202ENST00000438552 GADD45AP24522 165 aa13.35□□□□□ -0.27
SNRPB-202ENST00000438552 MYL9P24844 172 aa13.35□□□□□ -0.27
SNRPB-202ENST00000438552 BMXP51813 675 aa13.35□□□□□ -0.27
SNRPB-202ENST00000438552 SCN1BQ07699 218 aa13.35□□□□□ -0.27
SNRPB-202ENST00000438552 GLT8D1Q68CQ7 371 aa13.35□□□□□ -0.27
SNRPB-202ENST00000438552 C17orf107Q6ZR85 190 aa13.35□□□□□ -0.27
SNRPB-202ENST00000438552 C1orf147Q96MC9 270 aaPredicted RBP13.35□□□□□ -0.27
SNRPB-202ENST00000438552 KCNK15Q9H427 330 aa13.35□□□□□ -0.27
SNRPB-202ENST00000438552 TXNL4BQ9NX01 149 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms