RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 M1APQ8TC57 530 aa13.54□□□□□ -0.24
SCARF1-203ENST00000434376 OR5AC2Q9NZP5 309 aa13.54□□□□□ -0.24
SCARF1-203ENST00000434376 MIOXQ9UGB7 285 aa13.54□□□□□ -0.24
SCARF1-203ENST00000434376 INTS1Q8N201 2190 aaKnown RBP13.53□□□□□ -0.24
SCARF1-203ENST00000434376 LOC102723996A0A087X1L8 192 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 A0A0A6YYH2 397 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 A6NJ64 397 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 HSPB2A8KAH6 182 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 TMEM14DPA8MWL7 114 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 LDLRAD4O15165 306 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 XRCC2O43543 280 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 DKK1O94907 266 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 CD8AP01732 235 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 SP9P0CG40 484 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 POLR2GP62487 172 aaKnown RBP eCLIP13.53□□□□□ -0.24
SCARF1-203ENST00000434376 RIPPLY1Q0D2K3 151 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 CLINT1Q14677 625 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 HSPB2Q16082 182 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 UQCC3Q6UW78 93 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 ZSCAN4Q8NAM6 433 aaPredicted RBP13.53□□□□□ -0.24
SCARF1-203ENST00000434376 OR56B2PQ8NGI1 322 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 TERB2Q8NHR7 220 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 SECTM1Q8WVN6 248 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 PSMF1Q92530 271 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 HS3ST6Q96QI5 342 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 ST3GAL6Q9Y274 331 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 LIPGQ9Y5X9 500 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 NCKAP5O14513 1909 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 ABCA1O95477 2261 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 IGKV1-27A0A075B6S5 117 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 TMEM265A0A087WTH1 108 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 A6NLC8 198 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 CRHP06850 196 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 ZBTB25P24278 435 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 RPL7L1Q6DKI1 246 aaKnown RBP13.53□□□□□ -0.24
SCARF1-203ENST00000434376 DRAM2Q6UX65 266 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 PGAP1Q75T13 922 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 GGNQ86UU5 652 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 CNEP1R1Q8N9A8 125 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 CPEB3Q8NE35 698 aaKnown RBP13.53□□□□□ -0.24
SCARF1-203ENST00000434376 DEFB124Q8NES8 71 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 EIF5A2Q9GZV4 153 aaKnown RBP13.53□□□□□ -0.24
SCARF1-203ENST00000434376 GHRLQ9UBU3 117 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 FZR1Q9UM11 496 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 DOCK11Q5JSL3 2073 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 ZZEF1O43149 2961 aa13.53□□□□□ -0.24
SCARF1-203ENST00000434376 HS3ST1O14792 307 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 MT-CO3P00414 261 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 SRD5A2P31213 254 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 CXorf67Q86X51 503 aaPredicted RBP13.52□□□□□ -0.24
SCARF1-203ENST00000434376 CALHM1Q8IU99 346 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 OR13G1Q8NGZ3 307 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 IL1F10Q8WWZ1 152 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 OIT3Q8WWZ8 545 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 RDH5Q92781 318 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 SLAMF9Q96A28 289 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 C5orf66Q9H5L9 145 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 RNASEK-C17orf49H0YIS7 233 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 EFSO43281 561 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 ARG1P05089 322 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 HAAOP46952 286 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 PJVKQ0ZLH3 352 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 MEF2DQ14814 521 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 DCAF10Q5QP82 559 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 CLEC18BQ6UXF7 455 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 OR11L1Q8NGX0 322 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 NRIP2Q9BQI9 281 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 PECRQ9BY49 303 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 ALX4Q9H161 411 aaPredicted RBP13.52□□□□□ -0.24
SCARF1-203ENST00000434376 GSN-AS1Q9NRJ2 163 aa13.52□□□□□ -0.24
SCARF1-203ENST00000434376 A0A1W2PPE3 182 aa13.52□□□□□ -0.25
SCARF1-203ENST00000434376 NKX2-8O15522 239 aa13.52□□□□□ -0.25
SCARF1-203ENST00000434376 ECH1Q13011 328 aa13.52□□□□□ -0.25
SCARF1-203ENST00000434376 ZNF345Q14585 488 aa13.52□□□□□ -0.25
SCARF1-203ENST00000434376 ZGRF1Q86YA3 2104 aa13.52□□□□□ -0.25
SCARF1-203ENST00000434376 PHYHIPLQ96FC7 376 aa13.52□□□□□ -0.25
SCARF1-203ENST00000434376 TMEM38BQ9NVV0 291 aa13.52□□□□□ -0.25
SCARF1-203ENST00000434376 NME2P1O60361 137 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 SERPINA7P05543 415 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 SLC25A53Q5H9E4 307 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 C9orf152Q5JTZ5 239 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 NCMAPQ5T1S8 102 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 DHRS7BQ6IAN0 325 aaPredicted RBP13.51□□□□□ -0.25
SCARF1-203ENST00000434376 LPCAT3Q6P1A2 487 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 C1orf147Q96MC9 270 aaPredicted RBP13.51□□□□□ -0.25
SCARF1-203ENST00000434376 TAAR9Q96RI9 348 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 BCL2L14Q9BZR8 327 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 PRSS50Q9UI38 385 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 MED12LQ86YW9 2145 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 F8VVB4 439 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 F8VWA3 439 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 NDUFS6O75380 124 aaKnown RBP13.51□□□□□ -0.25
SCARF1-203ENST00000434376 VAMP5O95183 116 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 SYNGR4O95473 234 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 RAB32Q13637 225 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 SSPNQ14714 243 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 ANKRD55Q3KP44 614 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 SLC22A25Q6T423 547 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 SLC25A42Q86VD7 318 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 OR2M7Q8NG81 312 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms