RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 NOVA1P51513 510 aaKnown RBP10.21□□□□□ -0.77
CD44-209ENST00000433892 MALLQ13021 153 aa10.21□□□□□ -0.77
CD44-209ENST00000433892 SWI5Q1ZZU3 235 aa10.21□□□□□ -0.77
CD44-209ENST00000433892 FAM76BQ5HYJ3 339 aa10.21□□□□□ -0.77
CD44-209ENST00000433892 RAB11FIP2Q7L804 512 aa10.21□□□□□ -0.77
CD44-209ENST00000433892 PPP1R32Q7Z5V6 425 aa10.21□□□□□ -0.77
CD44-209ENST00000433892 LINC00518Q8N0U6 118 aa10.21□□□□□ -0.77
CD44-209ENST00000433892 UBAC2Q8NBM4 344 aa10.21□□□□□ -0.77
CD44-209ENST00000433892 OR52M1Q8NGK5 317 aa10.21□□□□□ -0.77
CD44-209ENST00000433892 OR2V1Q8NHB1 315 aa10.21□□□□□ -0.77
CD44-209ENST00000433892 GLYATL2Q8WU03 294 aa10.21□□□□□ -0.77
CD44-209ENST00000433892 ADGRG7Q96K78 797 aa10.21□□□□□ -0.77
CD44-209ENST00000433892 PLEKHA2Q9HB19 425 aa10.21□□□□□ -0.77
CD44-209ENST00000433892 ZNF286AQ9HBT8 521 aa10.21□□□□□ -0.77
CD44-209ENST00000433892 GPR35Q9HC97 309 aa10.21□□□□□ -0.77
CD44-209ENST00000433892 DEPPQ9NTK1 212 aa10.21□□□□□ -0.77
CD44-209ENST00000433892 ZFP57Q9NU63 452 aa10.21□□□□□ -0.77
CD44-209ENST00000433892 P4HTMQ9NXG6 502 aa10.21□□□□□ -0.77
CD44-209ENST00000433892 NSG2Q9Y328 171 aa10.21□□□□□ -0.77
CD44-209ENST00000433892 YKT6O15498 198 aa10.21□□□□□ -0.78
CD44-209ENST00000433892 PHF1O43189 567 aaPredicted RBP10.21□□□□□ -0.78
CD44-209ENST00000433892 PDCD6O75340 191 aa10.21□□□□□ -0.78
CD44-209ENST00000433892 OR7C1O76099 320 aaPredicted RBP10.21□□□□□ -0.78
CD44-209ENST00000433892 EDN3P14138 238 aa10.21□□□□□ -0.78
CD44-209ENST00000433892 PRKACAP17612 351 aa10.21□□□□□ -0.78
CD44-209ENST00000433892 NPBWR2P48146 333 aa10.21□□□□□ -0.78
CD44-209ENST00000433892 AKIRIN2Q53H80 203 aa10.21□□□□□ -0.78
CD44-209ENST00000433892 ABLIM2Q6H8Q1 611 aa10.21□□□□□ -0.78
CD44-209ENST00000433892 SLC23A3Q6PIS1 610 aa10.21□□□□□ -0.78
CD44-209ENST00000433892 LIAT1Q6ZQX7 453 aa10.21□□□□□ -0.78
CD44-209ENST00000433892 KIRREL1Q96J84 757 aa10.21□□□□□ -0.78
CD44-209ENST00000433892 AKR1E2Q96JD6 320 aa10.21□□□□□ -0.78
CD44-209ENST00000433892 ZNF442Q9H7R0 627 aa10.21□□□□□ -0.78
CD44-209ENST00000433892 WFDC1Q9HC57 220 aa10.21□□□□□ -0.78
CD44-209ENST00000433892 CCDC163A0A0D9SF12 145 aa10.2□□□□□ -0.78
CD44-209ENST00000433892 PINLYPA6NC86 204 aa10.2□□□□□ -0.78
CD44-209ENST00000433892 H7C1Q1 480 aa10.2□□□□□ -0.78
CD44-209ENST00000433892 PDGFBP01127 241 aaPredicted RBP10.2□□□□□ -0.78
CD44-209ENST00000433892 AADACP22760 399 aa10.2□□□□□ -0.78
CD44-209ENST00000433892 GDF1P27539 372 aa10.2□□□□□ -0.78
CD44-209ENST00000433892 RBM11P57052 281 aaKnown RBP10.2□□□□□ -0.78
CD44-209ENST00000433892 PCBD1P61457 104 aa10.2□□□□□ -0.78
CD44-209ENST00000433892 ACER2Q5QJU3 275 aa10.2□□□□□ -0.78
CD44-209ENST00000433892 SLC25A26Q70HW3 274 aa10.2□□□□□ -0.78
CD44-209ENST00000433892 ZNF100Q8IYN0 542 aa10.2□□□□□ -0.78
CD44-209ENST00000433892 ZNF611Q8N823 705 aa10.2□□□□□ -0.78
CD44-209ENST00000433892 CPEB3Q8NE35 698 aaKnown RBP10.2□□□□□ -0.78
CD44-209ENST00000433892 MSI2Q96DH6 328 aaKnown RBP10.2□□□□□ -0.78
CD44-209ENST00000433892 C18orf12Q96KH6 178 aa10.2□□□□□ -0.78
CD44-209ENST00000433892 SUCNR1Q9BXA5 334 aa10.2□□□□□ -0.78
CD44-209ENST00000433892 RGCCQ9H4X1 137 aa10.2□□□□□ -0.78
CD44-209ENST00000433892 ZNF391Q9UJN7 358 aa10.2□□□□□ -0.78
CD44-209ENST00000433892 ZNF175Q9Y473 711 aa10.2□□□□□ -0.78
CD44-209ENST00000433892 TNRC6BQ9UPQ9 1833 aaKnown RBP10.2□□□□□ -0.78
CD44-209ENST00000433892 PRRC2CQ9Y520 2896 aaKnown RBP10.2□□□□□ -0.78
CD44-209ENST00000433892 ZNF816-ZNF321PA0A0X1KG74 233 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 PCP4L1A6NKN8 68 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 FAM157AC9JC47 383 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 NME2P1O60361 137 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 DUSP1P28562 367 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 RFC3P40938 356 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 FHITP49789 147 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 DUSP3P51452 185 aaPredicted RBP10.19□□□□□ -0.78
CD44-209ENST00000433892 DVL1P1P54792 670 aaPredicted RBP10.19□□□□□ -0.78
CD44-209ENST00000433892 DAZAP2Q15038 168 aaPredicted RBP10.19□□□□□ -0.78
CD44-209ENST00000433892 OR8B8Q15620 311 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 IGSF11Q5DX21 431 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 RIPPLY2Q5TAB7 128 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 C9orf135Q5VTT2 229 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 FBXW12Q6X9E4 464 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 MEX3BQ6ZN04 569 aaKnown RBP10.19□□□□□ -0.78
CD44-209ENST00000433892 ETV3LQ6ZN32 361 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 C5orf24Q7Z6I8 188 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 LRTM2Q8N967 370 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 RXFP4Q8TDU9 374 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 SECTM1Q8WVN6 248 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 MOB3AQ96BX8 217 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 TP53RKQ96S44 253 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 SYT3Q9BQG1 590 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 FAM212BQ9NTI7 297 aaPredicted RBP10.19□□□□□ -0.78
CD44-209ENST00000433892 IL36GQ9NZH8 169 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 TCFL5Q9UL49 500 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 ZDHHC8Q9ULC8 765 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 STARD10Q9Y365 291 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 MEX3AA1L020 520 aaKnown RBP10.19□□□□□ -0.78
CD44-209ENST00000433892 TSPAN15O95858 294 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 CRYBA1P05813 215 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 MMP7P09237 267 aaPredicted RBP10.19□□□□□ -0.78
CD44-209ENST00000433892 FUT3P21217 361 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 CCNOP22674 350 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 RPL35P42766 123 aaKnown RBP10.19□□□□□ -0.78
CD44-209ENST00000433892 GLP1RP43220 463 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 PPT1P50897 306 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 RAB13P51153 203 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 AKR1D1P51857 326 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 HERV-K104P61576 105 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 NHLH2Q02577 135 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 ZNF616Q08AN1 781 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 MIDNQ504T8 468 aa10.19□□□□□ -0.78
CD44-209ENST00000433892 LGI3Q8N145 548 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms