RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 ADAD2Q8NCV1 583 aaKnown RBP6.44□□□□□ -1.38
COL17A1-204ENST00000433822 CSNK2A3Q8NEV1 391 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 OR13G1Q8NGZ3 307 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 OR10D3Q8NH80 312 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 PIK3IP1Q96FE7 263 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 REEP6Q96HR9 211 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 C2orf50Q96LR7 162 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 NKX3-1Q99801 234 aaPredicted RBP6.44□□□□□ -1.38
COL17A1-204ENST00000433822 RTBDNQ9BSG5 229 aaPredicted RBP6.44□□□□□ -1.38
COL17A1-204ENST00000433822 SMOC1Q9H4F8 434 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 BANF2Q9H503 90 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 BCO1Q9HAY6 547 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 BARX1Q9HBU1 254 aaPredicted RBP6.44□□□□□ -1.38
COL17A1-204ENST00000433822 GPR35Q9HC97 309 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 C1orf123Q9NWV4 160 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 P4HTMQ9NXG6 502 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 MYEF2Q9P2K5 600 aaKnown RBP6.44□□□□□ -1.38
COL17A1-204ENST00000433822 SLC7A11Q9UPY5 501 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 C14orf166Q9Y224 244 aaKnown RBP6.44□□□□□ -1.38
COL17A1-204ENST00000433822 DOPEY1Q5JWR5 2465 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 CRYM-AS1A6NIL9 109 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 CXCL13O43927 109 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 SS18L1O75177 396 aaPredicted RBP6.43□□□□□ -1.38
COL17A1-204ENST00000433822 NRASP01111 189 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 IFNA2P01563 188 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 OPN1LWP04000 364 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 GAPDHP04406 335 aaKnown RBP6.43□□□□□ -1.38
COL17A1-204ENST00000433822 CSN2P05814 226 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 GLAP06280 429 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 ZNF250P15622 560 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 ANOS1P23352 680 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 VAMP1P23763 118 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 ACKR3P25106 362 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 SERPINF1P36955 418 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 MPLP40238 635 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 STARP49675 285 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 MTCP1P56278 107 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 PSG4Q00888 419 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 SNTB1Q13884 538 aaKnown RBP6.43□□□□□ -1.38
COL17A1-204ENST00000433822 CEACAM16Q2WEN9 425 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 CHRFAM7AQ494W8 412 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 ELP2Q6IA86 826 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 TMEM211Q6ICI0 200 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 RPUSD3Q6P087 351 aaKnown RBP6.43□□□□□ -1.38
COL17A1-204ENST00000433822 RAB11FIP2Q7L804 512 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 C1QL2Q7Z5L3 287 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 LINC00596Q86U02 117 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 POC1AQ8NBT0 407 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 OR2I1PQ8NGU4 316 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 ADAMTS17Q8TE56 1095 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 GTF3AQ92664 365 aaKnown RBP6.43□□□□□ -1.38
COL17A1-204ENST00000433822 BORCS8Q96FH0 119 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 JSRP1Q96MG2 331 aaPredicted RBP6.43□□□□□ -1.38
COL17A1-204ENST00000433822 SPACA5Q96QH8 159 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 RNF126Q9BV68 326 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 SCNM1Q9BWG6 230 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 SUCNR1Q9BXA5 334 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 WNT5BQ9H1J7 359 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 NARFLQ9H6Q4 476 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 LDAHQ9H6V9 325 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 ZNF703Q9H7S9 590 aaPredicted RBP6.43□□□□□ -1.38
COL17A1-204ENST00000433822 RHOFQ9HBH0 211 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 CRLF2Q9HC73 371 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 NECAP2Q9NVZ3 263 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 PLEKHJ1Q9NW61 149 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 EHFQ9NZC4 300 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 MBD2Q9UBB5 411 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 ANXA10Q9UJ72 324 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 TUBD1Q9UJT1 453 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 MYO7BQ6PIF6 2116 aa6.43□□□□□ -1.38
COL17A1-204ENST00000433822 PTPRQQ9UMZ3 2332 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 IGHV3-15A0A0B4J1V0 119 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 A0A1W2PP11 408 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 C5orf63A6NC05 138 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 C5orf51A6NDU8 294 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 TMEM8BA6NDV4 472 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 ZSCAN5BA6NJL1 495 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 LRP3O75074 770 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 PDCD6O75340 191 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 SPDEFO95238 335 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 ACTL6AO96019 429 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 CST4P01036 141 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 HOXD4P09016 255 aaPredicted RBP6.42□□□□□ -1.38
COL17A1-204ENST00000433822 DBHP09172 617 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 WNT2P09544 360 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 ZNF708P17019 499 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 AKR1C4P17516 323 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 SERPINA2P20848 420 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 GDF1P27539 372 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 OTX2P32243 289 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 RBMXP38159 391 aaKnown RBP6.42□□□□□ -1.38
COL17A1-204ENST00000433822 HTR5AP47898 357 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 LHX2P50458 406 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 LUMP51884 338 aaPredicted RBP6.42□□□□□ -1.38
COL17A1-204ENST00000433822 CLDN15P56746 228 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 SOX8P57073 446 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 PPIAP62937 165 aaKnown RBP6.42□□□□□ -1.38
COL17A1-204ENST00000433822 FAM3AP98173 230 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 PDZK1IP1Q13113 114 aa6.42□□□□□ -1.38
COL17A1-204ENST00000433822 AIMP2Q13155 320 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms