RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 PRKACAP17612 351 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 CELP19835 753 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 RAB3AP20336 220 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 EEF1B2P24534 225 aaKnown RBP4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 FPR2P25090 351 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 MPZP25189 248 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 TGFBR2P37173 567 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 VHLP40337 213 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 MAP2K4P45985 399 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 WNT4P56705 351 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 ERVFRD-1P60508 538 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 ERVK11-1P61568 191 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 COL10A1Q03692 680 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 PDZK1IP1Q13113 114 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 RIPK1Q13546 671 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 KISS1Q15726 138 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 SMIM21Q3B7S5 101 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 METTL11BQ5VVY1 283 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 RUSC1-AS1Q66K80 236 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 METAP1DQ6UB28 335 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 LHFPL2Q6ZUX7 228 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 VMO1Q7Z5L0 202 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 FAM185AQ8N0U4 392 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 FAM58AQ8N1B3 248 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 BPIFB2Q8N4F0 458 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 TEX29Q8N6K0 151 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 TPRX1Q8N7U7 411 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 ASCC1Q8N9N2 400 aaKnown RBP4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 OR52N4Q8NGI2 321 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 OR51A2Q8NGJ7 313 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 HAVCR2Q8TDQ0 301 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 GPR148Q8TDV2 347 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 EMG1Q92979 244 aaKnown RBP4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 LHX4Q969G2 390 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 TMEM106AQ96A25 262 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 WDFY2Q96P53 400 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 DUX5Q96PT3 197 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 OR5M11Q96RB7 305 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 NR1H4Q96RI1 486 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 NRIP2Q9BQI9 281 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 DCTN5Q9BTE1 182 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 TNFRSF19Q9NS68 423 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 RBFOX1Q9NWB1 397 aaKnown RBP4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 FKBP14Q9NWM8 211 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 PAK1IP1Q9NWT1 392 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 GFOD1Q9NXC2 390 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 IL36RNQ9UBH0 155 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 RPUSD1Q9UJJ7 312 aaKnown RBP4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 NUP50Q9UKX7 468 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 GSTK1Q9Y2Q3 226 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 RRP15Q9Y3B9 282 aaKnown RBP4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 FN1P02751 2386 aaKnown RBP4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 CSPG4Q6UVK1 2322 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 TRAV40A0A0B4J280 105 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 CENPVL3A0A0U1RRI6 287 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 MDFIC2A0A1B0GVS7 189 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 SIRPB1O00241 398 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 SIGLEC5O15389 551 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 RGS10O43665 173 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 SULT1B1O43704 296 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 CDRT1O95170 752 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 MT-ND2P03891 347 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 TK1P04183 234 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 CD2P06729 351 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 CHRM2P08172 466 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 GABRR1P24046 479 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 EDDM3BP56851 147 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 RPS11P62280 158 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 SPHARQ15513 63 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 Q499Y3 187 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 DMKNQ6E0U4 476 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 ASPHD2Q6ICH7 369 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 CRIP3Q6Q6R5 217 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 RBMS3Q6XE24 437 aaKnown RBP4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 UTS2BQ765I0 119 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 PNKDQ8N490 385 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 ZNF561Q8N587 486 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 PARP16Q8N5Y8 322 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 SIGLECL1Q8N7X8 197 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 ZNF485Q8NCK3 441 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 LY6G5BQ8NDX9 201 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 DNAAF1Q8NEP3 725 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 OR10K1Q8NGX5 313 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 OR52N1Q8NH53 320 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 ZNF418Q8TF45 676 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 TNFAIP8L1Q8WVP5 186 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 TMEM203Q969S6 136 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 DACT3Q96B18 629 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 SPSB1Q96BD6 273 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 UPRTQ96BW1 309 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 SMIM19Q96E16 107 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 SDSLQ96GA7 329 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 OR14A2Q96R54 314 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 TBX15Q96SF7 602 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 TMED9Q9BVK6 235 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 MND1Q9BWT6 205 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 CDCA4Q9BXL8 241 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 ANKRD60Q9BZ19 345 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 FAM192AQ9GZU8 254 aa4.75□□□□□ -1.65
HMGB3P24-201ENST00000433260 CHST6Q9GZX3 395 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms