RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 C22orf42Q6IC83 251 aa15.3■□□□□ 0.04
RFTN1-202ENST00000431547 OR4D6Q8NGJ1 314 aa15.3■□□□□ 0.04
RFTN1-202ENST00000431547 OR51E2Q9H255 320 aa15.3■□□□□ 0.04
RFTN1-202ENST00000431547 ELL3Q9HB65 397 aaPredicted RBP15.3■□□□□ 0.04
RFTN1-202ENST00000431547 TXNL4BQ9NX01 149 aaKnown RBP15.3■□□□□ 0.04
RFTN1-202ENST00000431547 IL36RNQ9UBH0 155 aa15.3■□□□□ 0.04
RFTN1-202ENST00000431547 OR5V1Q9UGF6 321 aa15.3■□□□□ 0.04
RFTN1-202ENST00000431547 GLS2Q9UI32 602 aa15.3■□□□□ 0.04
RFTN1-202ENST00000431547 KCNS2Q9ULS6 477 aa15.3■□□□□ 0.04
RFTN1-202ENST00000431547 MRPS28Q9Y2Q9 187 aaKnown RBP15.3■□□□□ 0.04
RFTN1-202ENST00000431547 LOC105371242A0A075B767 164 aa15.29■□□□□ 0.04
RFTN1-202ENST00000431547 SELLP14151 372 aa15.29■□□□□ 0.04
RFTN1-202ENST00000431547 GATA3P23771 443 aa15.29■□□□□ 0.04
RFTN1-202ENST00000431547 CEBPDP49716 269 aaPredicted RBP15.29■□□□□ 0.04
RFTN1-202ENST00000431547 CAV3P56539 151 aa15.29■□□□□ 0.04
RFTN1-202ENST00000431547 GLIPR1L1Q6UWM5 242 aa15.29■□□□□ 0.04
RFTN1-202ENST00000431547 Q71RC1 249 aaPredicted RBP15.29■□□□□ 0.04
RFTN1-202ENST00000431547 LURAP1LQ8IV03 231 aa15.29■□□□□ 0.04
RFTN1-202ENST00000431547 ZNRF1Q8ND25 227 aa15.29■□□□□ 0.04
RFTN1-202ENST00000431547 OR51T1Q8NGJ9 327 aa15.29■□□□□ 0.04
RFTN1-202ENST00000431547 OR10K1Q8NGX5 313 aa15.29■□□□□ 0.04
RFTN1-202ENST00000431547 TBC1D15Q8TC07 691 aa15.29■□□□□ 0.04
RFTN1-202ENST00000431547 RAB40AQ8WXH6 277 aa15.29■□□□□ 0.04
RFTN1-202ENST00000431547 DACT3Q96B18 629 aaPredicted RBP15.29■□□□□ 0.04
RFTN1-202ENST00000431547 YIPF6Q96EC8 236 aa15.29■□□□□ 0.04
RFTN1-202ENST00000431547 GFI1Q99684 422 aa15.29■□□□□ 0.04
RFTN1-202ENST00000431547 MRPS26Q9BYN8 205 aaKnown RBP15.29■□□□□ 0.04
RFTN1-202ENST00000431547 FAM234AQ9H0X4 552 aa15.29■□□□□ 0.04
RFTN1-202ENST00000431547 EXOSC4Q9NPD3 245 aaKnown RBP15.29■□□□□ 0.04
RFTN1-202ENST00000431547 MMP26Q9NRE1 261 aa15.29■□□□□ 0.04
RFTN1-202ENST00000431547 GHRLQ9UBU3 117 aa15.29■□□□□ 0.04
RFTN1-202ENST00000431547 SLC25A10Q9UBX3 287 aaPredicted RBP15.29■□□□□ 0.04
RFTN1-202ENST00000431547 METRNQ9UJH8 293 aa15.29■□□□□ 0.04
RFTN1-202ENST00000431547 GSTK1Q9Y2Q3 226 aa15.29■□□□□ 0.04
RFTN1-202ENST00000431547 AK6Q9Y3D8 172 aaKnown RBP15.29■□□□□ 0.04
RFTN1-202ENST00000431547 SH2D1BO14796 132 aa15.28■□□□□ 0.04
RFTN1-202ENST00000431547 HTR3BO95264 441 aa15.28■□□□□ 0.04
RFTN1-202ENST00000431547 HAND1O96004 215 aa15.28■□□□□ 0.04
RFTN1-202ENST00000431547 CSTBP04080 98 aaKnown RBP15.28■□□□□ 0.04
RFTN1-202ENST00000431547 GADD45AP24522 165 aa15.28■□□□□ 0.04
RFTN1-202ENST00000431547 MYL9P24844 172 aa15.28■□□□□ 0.04
RFTN1-202ENST00000431547 DUSP1P28562 367 aa15.28■□□□□ 0.04
RFTN1-202ENST00000431547 COL10A1Q03692 680 aa15.28■□□□□ 0.04
RFTN1-202ENST00000431547 AWAT2Q6E213 333 aa15.28■□□□□ 0.04
RFTN1-202ENST00000431547 GDPGP1Q6ZNW5 385 aa15.28■□□□□ 0.04
RFTN1-202ENST00000431547 ST8SIA4Q92187 359 aa15.28■□□□□ 0.04
RFTN1-202ENST00000431547 C1orf147Q96MC9 270 aaPredicted RBP15.28■□□□□ 0.04
RFTN1-202ENST00000431547 TMEM160Q9NX00 188 aa15.28■□□□□ 0.04
RFTN1-202ENST00000431547 A0A0G2JMP0 313 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 A0A0X1KG70 313 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 KIR2DS1A0A191URI9 304 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 SHISA3A0PJX4 238 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 C22orf46C9J442 243 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 J3QLI3 93 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 K7N7A8 449 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 PDCD5O14737 125 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 SLC22A1O15245 554 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 ZNF737O75373 536 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 UBBP0CG47 229 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 LMO1P25800 156 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 SNU13P55769 128 aaKnown RBP15.27■□□□□ 0.04
RFTN1-202ENST00000431547 TIMM50Q3ZCQ8 353 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 SLC22A6Q4U2R8 563 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 NHLRC3Q5JS37 347 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 DCAF12L2Q5VW00 463 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 BTN2A1Q7KYR7 527 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 OSR2Q8N2R0 312 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 FGFRL1Q8N441 504 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 TMEM185AQ8NFB2 350 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 OR4M2Q8NGB6 313 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 OR6M1Q8NGM8 313 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 MRPS24Q96EL2 167 aaKnown RBP15.27■□□□□ 0.04
RFTN1-202ENST00000431547 CHCHD6Q9BRQ6 235 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 INSIG2Q9Y5U4 225 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 V9GY05 133 aa15.27■□□□□ 0.04
RFTN1-202ENST00000431547 ZANQ9Y493 2812 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 IGHV2-70DA0A0C4DH43 119 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 SLC17A2O00624 439 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 TK1P04183 234 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 LIPFP07098 398 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 GTF2F2P13984 249 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 NDUFB7P17568 137 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 SERPINA2P20848 420 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 HTR2CP28335 458 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 CAPZA1P52907 286 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 IL13RA2Q14627 380 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 FAHD2BQ6P2I3 314 aaPredicted RBP15.26■□□□□ 0.03
RFTN1-202ENST00000431547 Q6P435 159 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 OR13F1Q8NGS4 319 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 SLC25A28Q96A46 364 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 FAHD2AQ96GK7 314 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 SNX22Q96L94 193 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 DMRTB1Q96MA1 342 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 KCTD7Q96MP8 289 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 NUDT16L1Q9BRJ7 211 aaKnown RBP15.26■□□□□ 0.03
RFTN1-202ENST00000431547 DCTN5Q9BTE1 182 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 RPUSD1Q9UJJ7 312 aaKnown RBP15.26■□□□□ 0.03
RFTN1-202ENST00000431547 ST3GAL6Q9Y274 331 aa15.26■□□□□ 0.03
RFTN1-202ENST00000431547 TMEM82A0PJX8 343 aa15.25■□□□□ 0.03
RFTN1-202ENST00000431547 DEGS1O15121 323 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms