RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 FUT6P51993 359 aa9.82□□□□□ -0.84
USP4-205ENST00000431357 MLF1P58340 268 aa9.82□□□□□ -0.84
USP4-205ENST00000431357 C15orf54Q8N8G6 183 aa9.82□□□□□ -0.84
USP4-205ENST00000431357 SNIP1Q8TAD8 396 aaKnown RBP9.82□□□□□ -0.84
USP4-205ENST00000431357 MR1Q95460 341 aa9.82□□□□□ -0.84
USP4-205ENST00000431357 TOMM40LQ969M1 308 aa9.82□□□□□ -0.84
USP4-205ENST00000431357 C18orf12Q96KH6 178 aa9.82□□□□□ -0.84
USP4-205ENST00000431357 JSRP1Q96MG2 331 aaPredicted RBP9.82□□□□□ -0.84
USP4-205ENST00000431357 GINS3Q9BRX5 216 aa9.82□□□□□ -0.84
USP4-205ENST00000431357 RNF122Q9H9V4 155 aa9.82□□□□□ -0.84
USP4-205ENST00000431357 TMEM38BQ9NVV0 291 aa9.82□□□□□ -0.84
USP4-205ENST00000431357 PLA2G2EQ9NZK7 142 aa9.82□□□□□ -0.84
USP4-205ENST00000431357 STARD10Q9Y365 291 aa9.82□□□□□ -0.84
USP4-205ENST00000431357 STRAPQ9Y3F4 350 aaKnown RBP9.82□□□□□ -0.84
USP4-205ENST00000431357 TIMM10BQ9Y5J6 103 aa9.82□□□□□ -0.84
USP4-205ENST00000431357 NCOA6Q14686 2063 aaPredicted RBP9.81□□□□□ -0.84
USP4-205ENST00000431357 IGKV1-27A0A075B6S5 117 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 OR6C6A6NF89 314 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 FAM157AC9JC47 383 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 CRYBA1P05813 215 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 OR5AC1P0C628 307 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 DANCRP0C864 163 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 SRD5A2P31213 254 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 GLP1RP43220 463 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 PCP4P48539 62 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 RRADP55042 308 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 UCP2P55851 309 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 PCBD1P61457 104 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 TRA2AQ13595 282 aaKnown RBP eCLIP9.81□□□□□ -0.84
USP4-205ENST00000431357 SSPNQ14714 243 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 TMEM211Q6ICI0 200 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 ZNF774Q6NX45 483 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 FAM219AQ8IW50 185 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 OR2AE1Q8NHA4 323 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 RXFP4Q8TDU9 374 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 SGCZQ96LD1 299 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 SRXN1Q9BYN0 137 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 LIME1Q9H400 295 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 LUZP4Q9P127 313 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 SZT2Q5T011 3432 aa9.81□□□□□ -0.84
USP4-205ENST00000431357 MEX3AA1L020 520 aaKnown RBP9.8□□□□□ -0.84
USP4-205ENST00000431357 RNF224P0DH78 156 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 NFYBP25208 207 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 OPRM1P35372 400 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 RAB5BP61020 215 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 MALLQ13021 153 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 AGBL5Q8NDL9 886 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 OR10AD1Q8NGE0 317 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 MOB3AQ96BX8 217 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 ZNF837Q96EG3 531 aaPredicted RBP9.8□□□□□ -0.84
USP4-205ENST00000431357 LURAP1Q96LR2 239 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 SMIM3Q9BZL3 60 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 NCOR1P1Q9H4R4 102 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 CACFD1Q9UGQ2 172 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 TMED3Q9Y3Q3 217 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 HS3ST3B1Q9Y662 390 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 CEP290O15078 2479 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 NSG1A0A0A6YYJ2 146 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 COLCA2A8K830 154 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 AGPAT2O15120 278 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 ST8SIA3O43173 380 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 PDCD6O75340 191 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 IGHEP01854 428 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 OR8U9P0C7N5 309 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 ZNF32P17041 273 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 SNCAP37840 140 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 HTR5AP47898 357 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 CARD18P57730 90 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 SRPXP78539 464 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 HLA-BQ31612 363 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 RIPPLY2Q5TAB7 128 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 SLC22A25Q6T423 547 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 AAED1Q7RTV5 226 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 SLC16A13Q7RTY0 426 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 FAM185AQ8N0U4 392 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 OR2Y1Q8NGV0 311 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 OR8U1Q8NH10 309 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 IFI44Q8TCB0 444 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 SLC39A7Q92504 469 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 ERGIC1Q969X5 290 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 RSRP1Q9BUV0 290 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 EGLN1Q9GZT9 426 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 CRLF2Q9HC73 371 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 SLC2A9Q9NRM0 540 aa9.8□□□□□ -0.84
USP4-205ENST00000431357 CCDC187A0A096LP49 1063 aa9.79□□□□□ -0.84
USP4-205ENST00000431357 GEMIN2O14893 280 aaKnown RBP9.79□□□□□ -0.84
USP4-205ENST00000431357 GPR37O15354 613 aa9.79□□□□□ -0.84
USP4-205ENST00000431357 KLF7O75840 302 aaPredicted RBP9.79□□□□□ -0.84
USP4-205ENST00000431357 SPP1P10451 314 aa9.79□□□□□ -0.84
USP4-205ENST00000431357 TCN2P20062 427 aa9.79□□□□□ -0.84
USP4-205ENST00000431357 B3GALT5-AS1P59052 145 aa9.79□□□□□ -0.84
USP4-205ENST00000431357 FXYD4P59646 89 aa9.79□□□□□ -0.84
USP4-205ENST00000431357 HERV-K104P61576 105 aa9.79□□□□□ -0.84
USP4-205ENST00000431357 SP6Q3SY56 376 aa9.79□□□□□ -0.84
USP4-205ENST00000431357 FBXW12Q6X9E4 464 aa9.79□□□□□ -0.84
USP4-205ENST00000431357 LYZL2Q7Z4W2 148 aa9.79□□□□□ -0.84
USP4-205ENST00000431357 MSI2Q96DH6 328 aaKnown RBP9.79□□□□□ -0.84
USP4-205ENST00000431357 AKR1E2Q96JD6 320 aa9.79□□□□□ -0.84
USP4-205ENST00000431357 PFDN5Q99471 154 aa9.79□□□□□ -0.84
USP4-205ENST00000431357 NEU1Q99519 415 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms