RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 A6NDX4 124 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 G3V4G9 280 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 F2RL2O00254 374 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 FBXO24O75426 580 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 CIB2O75838 187 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 CYB5AP00167 134 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 ZNF20P17024 532 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 PEX2P28328 305 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 ATP1B3P54709 279 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 ISL1P61371 349 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 ZNF91Q05481 1191 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 MEF2CQ06413 473 aaPredicted RBP13.78□□□□□ -0.2
TRIM39-209ENST00000428728 NSUN5P1Q3KNT7 163 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 TRAPPC6BQ86SZ2 158 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 Q8IYB0 196 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 OR11H6Q8NGC7 330 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 OR52N4Q8NGI2 321 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 OR2G2Q8NGZ5 317 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 NDNFQ8TB73 568 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 RFT1Q96AA3 541 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 MALSU1Q96EH3 234 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 HILPDAQ9Y5L2 63 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 LINC00312Q9Y6C7 94 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 PRKDCP78527 4128 aaKnown RBP13.77□□□□□ -0.2
TRIM39-209ENST00000428728 IGKV1-9A0A0C4DH69 117 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 TRBV2A0A0J9YWF9 115 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 PSPNO60542 156 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 OPN1MWP04001 364 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 OPN1MW2P0DN77 364 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 OPN1MW3P0DN78 364 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 AZGP1P25311 298 aaKnown RBP13.77□□□□□ -0.21
TRIM39-209ENST00000428728 MTCP1P56278 107 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 OR12D2P58182 307 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 TMED1Q13445 227 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 ARSJQ5FYB0 599 aaPredicted RBP13.77□□□□□ -0.21
TRIM39-209ENST00000428728 ENTHD1Q8IYW4 607 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 FAM58AQ8N1B3 248 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 OR4S1Q8NGB4 309 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 PYDC1Q8WXC3 89 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 RNF166Q96A37 237 aaPredicted RBP13.77□□□□□ -0.21
TRIM39-209ENST00000428728 FGGYQ96C11 551 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 C10orf35Q96D05 121 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 OR5M11Q96RB7 305 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 SERTAD4Q9NUC0 356 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 PITPNC1Q9UKF7 332 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 SESN1Q9Y6P5 492 aa13.77□□□□□ -0.21
TRIM39-209ENST00000428728 IGHV2-26A0A0B4J1V2 119 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 DAPL1A0PJW8 107 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 SIRPB1O00241 398 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 ENTPD6O75354 484 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 ATP5HO75947 161 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 OCM2P0CE71 109 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 OCMP0CE72 109 aaPredicted RBP13.76□□□□□ -0.21
TRIM39-209ENST00000428728 CD28P10747 220 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 ATF1P18846 271 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 SLC34A1Q06495 639 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 TMEM244Q5VVB8 128 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 LHFPL2Q6ZUX7 228 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 DTX3Q8N9I9 347 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 DNAAF1Q8NEP3 725 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 OR10AC1Q8NH08 325 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 RNFT2Q96EX2 444 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 SPACA5Q96QH8 159 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 CDCA4Q9BXL8 241 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 CLEC7AQ9BXN2 247 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 FRRS1LQ9P0K9 344 aa13.76□□□□□ -0.21
TRIM39-209ENST00000428728 EI24O14681 340 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 MGST3O14880 152 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 PEX14O75381 377 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 PRB2P02812 416 aaPredicted RBP13.75□□□□□ -0.21
TRIM39-209ENST00000428728 HTR1AP08908 422 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 PRKACBP22694 351 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 OR3A1P47881 315 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 NANOS3P60323 173 aaKnown RBP13.75□□□□□ -0.21
TRIM39-209ENST00000428728 BEAN1Q3B7T3 259 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 TMEM95Q3KNT9 176 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 SPIN3Q5JUX0 258 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 PRAMEF5Q5TYX0 476 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 UTS2BQ765I0 119 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 Q8N2B8 174 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 OR5D18Q8NGL1 313 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 OR13C3Q8NGS6 347 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 OR13C9Q8NGT0 318 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 OPALINQ96PE5 141 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 PRSS22Q9GZN4 317 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 TMEM133Q9H2Q1 129 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 GLS2Q9UI32 602 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 GSTK1Q9Y2Q3 226 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 ORC6Q9Y5N6 252 aa13.75□□□□□ -0.21
TRIM39-209ENST00000428728 FAM172BPA6NC97 362 aa13.74□□□□□ -0.21
TRIM39-209ENST00000428728 SLC16A6O15403 523 aa13.74□□□□□ -0.21
TRIM39-209ENST00000428728 MMP23AO75900 390 aa13.74□□□□□ -0.21
TRIM39-209ENST00000428728 ALPLP05186 524 aa13.74□□□□□ -0.21
TRIM39-209ENST00000428728 P2RX3P56373 397 aa13.74□□□□□ -0.21
TRIM39-209ENST00000428728 PDZK1IP1Q13113 114 aa13.74□□□□□ -0.21
TRIM39-209ENST00000428728 ZNF146Q15072 292 aa13.74□□□□□ -0.21
TRIM39-209ENST00000428728 ZIK1Q3SY52 487 aaPredicted RBP13.74□□□□□ -0.21
TRIM39-209ENST00000428728 MINOS1Q5TGZ0 78 aa13.74□□□□□ -0.21
TRIM39-209ENST00000428728 BAIAP2L2Q6UXY1 529 aa13.74□□□□□ -0.21
TRIM39-209ENST00000428728 Q6ZS46 218 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms