RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ELK1P19419 428 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 MDH2P40926 338 aaKnown RBP6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 GPR6P46095 362 aaPredicted RBP6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 PITPNBP48739 271 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 CEBPDP49716 269 aaPredicted RBP6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 VEGFCP49767 419 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 PDLIM4P50479 330 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 MADCAM1Q13477 382 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 IL13RA2Q14627 380 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 ZMYND11Q15326 602 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 KCNJ8Q15842 424 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 TMEM69Q5SWH9 247 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 ATAD3CQ5T2N8 411 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 CNIH2Q6PI25 160 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 METAP1DQ6UB28 335 aaPredicted RBP6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 CLEC2AQ6UVW9 174 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 LINC00596Q86U02 117 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 LRRC28Q86X40 367 aaPredicted RBP6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM90A1Q86YD7 464 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 IZUMO1Q8IYV9 350 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 CMTM4Q8IZR5 234 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 DTX3Q8N9I9 347 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 CHST4Q8NCG5 386 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 Q8NFD4 153 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 OR4M1Q8NGD0 313 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 OR56B1Q8NGI3 324 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 NEK7Q8TDX7 302 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 RAB40AQ8WXH6 277 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 RAB1CQ92928 201 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 PTX4Q96A99 478 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 NICN1Q9BSH3 213 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 GSX2Q9BZM3 304 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 LPAR5Q9H1C0 372 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 MIXL1Q9H2W2 232 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 NARFLQ9H6Q4 476 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 MYOZ1Q9NP98 299 aaPredicted RBP6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 BEX4Q9NWD9 120 aaPredicted RBP6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 EXTL2Q9UBQ6 330 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 METRNQ9UJH8 293 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 WIPI2Q9Y4P8 454 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 PPIAL4AQ9Y536 164 aa6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 HEATR1Q9H583 2144 aaKnown RBP6.64□□□□□ -1.35
HMGA1P4-201ENST00000428643 A0A0A6YYD4 124 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM90A10PA6NDY2 464 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM90A18PA6NE21 464 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM90A16PA6NEW6 464 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM90A20PA6NIJ5 464 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM90A8PA6NJQ4 464 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM90A7PA6NKC0 464 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 RFPL4AA6NLU0 287 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM90A22PA8MWA6 464 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM90A12PA8MX19 464 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM90A5PA8MXJ8 464 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM90A23PA8MXZ1 464 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 RFPL4AL1F8VTS6 287 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 SH2D1BO14796 132 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 DEGS1O15121 323 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 OR2H2O95918 312 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 GYPAP02724 150 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM90A15PP0C7V4 464 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM90A13PP0C7W8 464 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM90A14PP0C7W9 464 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM90A24PP0C7X0 464 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 PSG2P11465 335 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 PAX1P15863 534 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 MUC1P15941 1255 aaPredicted RBP6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 CDK2P24941 298 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 BLVRBP30043 206 aaPredicted RBP6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 FBN2P35556 2912 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 GABRA2P47869 451 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 PDCD1Q15116 288 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 MPV17LQ2QL34 196 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 DEFB113Q30KQ7 82 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 PAN3Q58A45 887 aaKnown RBP6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 NHLRC3Q5JS37 347 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 SPANXN2Q5MJ10 180 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 TEX36Q5VZQ5 186 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 STUMQ69YW2 141 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 RAB12Q6IQ22 244 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 RAI1Q7Z5J4 1906 aaPredicted RBP6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 BIVMQ86UB2 503 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 ABCA12Q86UK0 2595 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 LURAP1LQ8IV03 231 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 MUC20Q8N307 709 aaPredicted RBP6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 ASCC1Q8N9N2 400 aaKnown RBP6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 OR6Q1Q8NGQ2 317 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM168AQ92567 244 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 RAB3CQ96E17 227 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 S100A16Q96FQ6 103 aaKnown RBP6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 DIRAS2Q96HU8 199 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 CMTM3Q96MX0 182 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 WDFY2Q96P53 400 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 NEDD4LQ96PU5 975 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 TM2D1Q9BX74 207 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 ABCG5Q9H222 651 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 SPACA1Q9HBV2 294 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 DIABLOQ9NR28 239 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 ZNF581Q9P0T4 197 aa6.63□□□□□ -1.35
HMGA1P4-201ENST00000428643 DCHS2Q6V1P9 2916 aa6.62□□□□□ -1.35
HMGA1P4-201ENST00000428643 IGKV1D-17A0A075B6S4 117 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms