RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 SEBOXQ9HB31 216 aaPredicted RBP20.32■□□□□ 0.84
VEGFA-209ENST00000425836 TXNL4BQ9NX01 149 aaKnown RBP20.32■□□□□ 0.84
VEGFA-209ENST00000425836 IL36GQ9NZH8 169 aa20.32■□□□□ 0.84
VEGFA-209ENST00000425836 OR5V1Q9UGF6 321 aa20.32■□□□□ 0.84
VEGFA-209ENST00000425836 KCNS2Q9ULS6 477 aa20.32■□□□□ 0.84
VEGFA-209ENST00000425836 SSR3Q9UNL2 185 aa20.32■□□□□ 0.84
VEGFA-209ENST00000425836 GSTK1Q9Y2Q3 226 aa20.32■□□□□ 0.84
VEGFA-209ENST00000425836 MRPS28Q9Y2Q9 187 aaKnown RBP20.32■□□□□ 0.84
VEGFA-209ENST00000425836 TRAV1-2A0A0B4J238 106 aa20.31■□□□□ 0.84
VEGFA-209ENST00000425836 SHISA3A0PJX4 238 aa20.31■□□□□ 0.84
VEGFA-209ENST00000425836 A8MV72 311 aaPredicted RBP20.31■□□□□ 0.84
VEGFA-209ENST00000425836 GADD45AP24522 165 aa20.31■□□□□ 0.84
VEGFA-209ENST00000425836 FGF12P61328 243 aa20.31■□□□□ 0.84
VEGFA-209ENST00000425836 PAX2Q02962 417 aa20.31■□□□□ 0.84
VEGFA-209ENST00000425836 LRRC10Q5BKY1 277 aa20.31■□□□□ 0.84
VEGFA-209ENST00000425836 SPIN3Q5JUX0 258 aa20.31■□□□□ 0.84
VEGFA-209ENST00000425836 GLIPR1L1Q6UWM5 242 aa20.31■□□□□ 0.84
VEGFA-209ENST00000425836 ZNF561Q8N587 486 aa20.31■□□□□ 0.84
VEGFA-209ENST00000425836 ST8SIA4Q92187 359 aa20.31■□□□□ 0.84
VEGFA-209ENST00000425836 AK6Q9Y3D8 172 aaKnown RBP20.31■□□□□ 0.84
VEGFA-209ENST00000425836 ABCA2Q9BZC7 2435 aa20.31■□□□□ 0.84
VEGFA-209ENST00000425836 LOC105371242A0A075B767 164 aa20.3■□□□□ 0.84
VEGFA-209ENST00000425836 PPIAL4CA0A0B4J2A2 164 aa20.3■□□□□ 0.84
VEGFA-209ENST00000425836 HTR3BO95264 441 aa20.3■□□□□ 0.84
VEGFA-209ENST00000425836 HAND1O96004 215 aa20.3■□□□□ 0.84
VEGFA-209ENST00000425836 BMXP51813 675 aa20.3■□□□□ 0.84
VEGFA-209ENST00000425836 COL10A1Q03692 680 aa20.3■□□□□ 0.84
VEGFA-209ENST00000425836 C1orf100Q5SVJ3 147 aa20.3■□□□□ 0.84
VEGFA-209ENST00000425836 YIPF6Q96EC8 236 aa20.3■□□□□ 0.84
VEGFA-209ENST00000425836 SLC25A10Q9UBX3 287 aaPredicted RBP20.3■□□□□ 0.84
VEGFA-209ENST00000425836 C22orf46C9J442 243 aa20.29■□□□□ 0.84
VEGFA-209ENST00000425836 CHRM2P08172 466 aa20.29■□□□□ 0.84
VEGFA-209ENST00000425836 AWAT2Q6E213 333 aa20.29■□□□□ 0.84
VEGFA-209ENST00000425836 BTN2A1Q7KYR7 527 aa20.29■□□□□ 0.84
VEGFA-209ENST00000425836 TMEM185AQ8NFB2 350 aa20.29■□□□□ 0.84
VEGFA-209ENST00000425836 DACT3Q96B18 629 aaPredicted RBP20.29■□□□□ 0.84
VEGFA-209ENST00000425836 C1orf147Q96MC9 270 aaPredicted RBP20.29■□□□□ 0.84
VEGFA-209ENST00000425836 CHCHD6Q9BRQ6 235 aa20.29■□□□□ 0.84
VEGFA-209ENST00000425836 MRPS26Q9BYN8 205 aaKnown RBP20.29■□□□□ 0.84
VEGFA-209ENST00000425836 GLS2Q9UI32 602 aa20.29■□□□□ 0.84
VEGFA-209ENST00000425836 ZNF780AO75290 641 aaPredicted RBP20.29■□□□□ 0.84
VEGFA-209ENST00000425836 MYL9P24844 172 aa20.29■□□□□ 0.84
VEGFA-209ENST00000425836 CAV3P56539 151 aa20.29■□□□□ 0.84
VEGFA-209ENST00000425836 SLC22A6Q4U2R8 563 aa20.29■□□□□ 0.84
VEGFA-209ENST00000425836 CD276Q5ZPR3 534 aa20.29■□□□□ 0.84
VEGFA-209ENST00000425836 OR51T1Q8NGJ9 327 aa20.29■□□□□ 0.84
VEGFA-209ENST00000425836 TBC1D15Q8TC07 691 aa20.29■□□□□ 0.84
VEGFA-209ENST00000425836 RAB40AQ8WXH6 277 aa20.29■□□□□ 0.84
VEGFA-209ENST00000425836 A0A0G2JMP0 313 aa20.28■□□□□ 0.84
VEGFA-209ENST00000425836 A0A0X1KG70 313 aa20.28■□□□□ 0.84
VEGFA-209ENST00000425836 A0A1W2PP11 408 aa20.28■□□□□ 0.84
VEGFA-209ENST00000425836 GPR37O15354 613 aa20.28■□□□□ 0.84
VEGFA-209ENST00000425836 CSTBP04080 98 aaKnown RBP20.28■□□□□ 0.84
VEGFA-209ENST00000425836 SERPINA2P20848 420 aa20.28■□□□□ 0.84
VEGFA-209ENST00000425836 C11orf91Q3C1V1 193 aa20.28■□□□□ 0.84
VEGFA-209ENST00000425836 DCAF12L2Q5VW00 463 aa20.28■□□□□ 0.84
VEGFA-209ENST00000425836 FAHD2BQ6P2I3 314 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-209ENST00000425836 OR4M2Q8NGB6 313 aa20.28■□□□□ 0.84
VEGFA-209ENST00000425836 FAHD2AQ96GK7 314 aa20.28■□□□□ 0.84
VEGFA-209ENST00000425836 PCDHB16Q9NRJ7 776 aa20.28■□□□□ 0.84
VEGFA-209ENST00000425836 MALRD1Q5VYJ5 2156 aa20.28■□□□□ 0.84
VEGFA-209ENST00000425836 ANK3Q12955 4377 aaKnown RBP20.27■□□□□ 0.84
VEGFA-209ENST00000425836 IGHV2-70DA0A0C4DH43 119 aa20.27■□□□□ 0.84
VEGFA-209ENST00000425836 LOC100506127A0A0U1RQW1 187 aa20.27■□□□□ 0.84
VEGFA-209ENST00000425836 SH2D1BO14796 132 aa20.27■□□□□ 0.84
VEGFA-209ENST00000425836 SLC22A1O15245 554 aa20.27■□□□□ 0.84
VEGFA-209ENST00000425836 ZNF737O75373 536 aa20.27■□□□□ 0.84
VEGFA-209ENST00000425836 ECDO95905 644 aaPredicted RBP20.27■□□□□ 0.84
VEGFA-209ENST00000425836 NDUFB7P17568 137 aa20.27■□□□□ 0.84
VEGFA-209ENST00000425836 CAPZA1P52907 286 aa20.27■□□□□ 0.84
VEGFA-209ENST00000425836 GPR176Q14439 515 aa20.27■□□□□ 0.84
VEGFA-209ENST00000425836 PIGYQ3MUY2 71 aa20.27■□□□□ 0.84
VEGFA-209ENST00000425836 Q6P435 159 aa20.27■□□□□ 0.84
VEGFA-209ENST00000425836 OSR2Q8N2R0 312 aa20.27■□□□□ 0.84
VEGFA-209ENST00000425836 INSIG2Q9Y5U4 225 aa20.27■□□□□ 0.84
VEGFA-209ENST00000425836 V9GY05 133 aa20.27■□□□□ 0.84
VEGFA-209ENST00000425836 KIR2DS1A0A191URI9 304 aa20.26■□□□□ 0.83
VEGFA-209ENST00000425836 TMEM82A0PJX8 343 aa20.26■□□□□ 0.83
VEGFA-209ENST00000425836 K7N7A8 449 aa20.26■□□□□ 0.83
VEGFA-209ENST00000425836 PDCD5O14737 125 aa20.26■□□□□ 0.83
VEGFA-209ENST00000425836 OR2H2O95918 312 aa20.26■□□□□ 0.83
VEGFA-209ENST00000425836 TK1P04183 234 aa20.26■□□□□ 0.83
VEGFA-209ENST00000425836 GATA3P23771 443 aa20.26■□□□□ 0.83
VEGFA-209ENST00000425836 HTR2CP28335 458 aa20.26■□□□□ 0.83
VEGFA-209ENST00000425836 PDCD1Q15116 288 aa20.26■□□□□ 0.83
VEGFA-209ENST00000425836 CR1LQ2VPA4 569 aa20.26■□□□□ 0.83
VEGFA-209ENST00000425836 C17orf107Q6ZR85 190 aa20.26■□□□□ 0.83
VEGFA-209ENST00000425836 ASCC1Q8N9N2 400 aaKnown RBP20.26■□□□□ 0.83
VEGFA-209ENST00000425836 OR6M1Q8NGM8 313 aa20.26■□□□□ 0.83
VEGFA-209ENST00000425836 OR13F1Q8NGS4 319 aa20.26■□□□□ 0.83
VEGFA-209ENST00000425836 NUDT16L1Q9BRJ7 211 aaKnown RBP20.26■□□□□ 0.83
VEGFA-209ENST00000425836 FAM234AQ9H0X4 552 aa20.26■□□□□ 0.83
VEGFA-209ENST00000425836 RNF167Q9H6Y7 350 aa20.26■□□□□ 0.83
VEGFA-209ENST00000425836 GHRLQ9UBU3 117 aa20.26■□□□□ 0.83
VEGFA-209ENST00000425836 INAFM1C9JVW0 142 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 GTF2F2P13984 249 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 PSMD7P51665 324 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 IL13RA2Q14627 380 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 NHLRC3Q5JS37 347 aa20.25■□□□□ 0.83
VEGFA-209ENST00000425836 SLC25A28Q96A46 364 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms