RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 C20orf196Q8IYI0 205 aa11.34□□□□□ -0.59
COL12A1-205ENST00000425443 MAML2Q8IZL2 1156 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-205ENST00000425443 ZNF837Q96EG3 531 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-205ENST00000425443 SMIM3Q9BZL3 60 aa11.34□□□□□ -0.59
COL12A1-205ENST00000425443 OR10A2Q9H208 303 aa11.34□□□□□ -0.59
COL12A1-205ENST00000425443 FLVCR1Q9Y5Y0 555 aa11.34□□□□□ -0.59
COL12A1-205ENST00000425443 MAP1BP46821 2468 aaKnown RBP11.34□□□□□ -0.59
COL12A1-205ENST00000425443 LOC102725191A0A1B0GVB3 256 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 GJE1A6NN92 205 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 ZIC3O60481 467 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 SFT2D2O95562 160 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 SCGB1D2O95969 90 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 TPT1P13693 172 aaKnown RBP11.33□□□□□ -0.6
COL12A1-205ENST00000425443 CDC34P49427 236 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-205ENST00000425443 SPEM2Q0P670 501 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 SURF2Q15527 256 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-205ENST00000425443 KISS1Q15726 138 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 KCNMB1Q16558 191 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 PIGLQ9Y2B2 252 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 SHANK1Q9Y566 2161 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 A0A0J9YW62 118 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 CBY3A6NI87 242 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 M0R135 149 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 MSTNO14793 375 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 TCN2P20062 427 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 ZNF468Q5VIY5 522 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-205ENST00000425443 SPAG16Q8N0X2 631 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 SVBPQ8N300 66 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 SPTSSAQ969W0 71 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 ZNF799Q96GE5 643 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 ZNF581Q9P0T4 197 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 IL17BQ9UHF5 180 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 TMEM210A6NLX4 147 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 MFNGO00587 321 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 FBXO24O75426 580 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 GSTP1P09211 210 aaKnown RBP11.33□□□□□ -0.6
COL12A1-205ENST00000425443 LPAR6P43657 344 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 H3F3AP84243 136 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 NHLH2Q02577 135 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 OR2A2Q6IF42 318 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 OR14K1Q8NGZ2 314 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 C22orf15Q8WYQ4 148 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 DYRK2Q92630 601 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 LYZL4Q96KX0 146 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 PADI1Q9ULC6 663 aa11.33□□□□□ -0.6
COL12A1-205ENST00000425443 FAM230AA0A1W2PPH8 454 aa11.32□□□□□ -0.6
COL12A1-205ENST00000425443 TBPP20226 339 aa11.32□□□□□ -0.6
COL12A1-205ENST00000425443 OPRM1P35372 400 aa11.32□□□□□ -0.6
COL12A1-205ENST00000425443 MLF1P58340 268 aa11.32□□□□□ -0.6
COL12A1-205ENST00000425443 CHRFAM7AQ494W8 412 aa11.32□□□□□ -0.6
COL12A1-205ENST00000425443 DCAF12Q5T6F0 453 aa11.32□□□□□ -0.6
COL12A1-205ENST00000425443 RPL7L1Q6DKI1 246 aaKnown RBP11.32□□□□□ -0.6
COL12A1-205ENST00000425443 TOMM40LQ969M1 308 aa11.32□□□□□ -0.6
COL12A1-205ENST00000425443 SLC5A7Q9GZV3 580 aa11.32□□□□□ -0.6
COL12A1-205ENST00000425443 TOLLIPQ9H0E2 274 aa11.32□□□□□ -0.6
COL12A1-205ENST00000425443 GPR173Q9NS66 373 aa11.32□□□□□ -0.6
COL12A1-205ENST00000425443 UQCC1Q9NVA1 299 aa11.32□□□□□ -0.6
COL12A1-205ENST00000425443 FBLN5Q9UBX5 448 aa11.32□□□□□ -0.6
COL12A1-205ENST00000425443 NTN3O00634 580 aaPredicted RBP11.32□□□□□ -0.6
COL12A1-205ENST00000425443 SPRY1O43609 319 aaPredicted RBP11.32□□□□□ -0.6
COL12A1-205ENST00000425443 NXPH2O95156 264 aa11.32□□□□□ -0.6
COL12A1-205ENST00000425443 RRADP55042 308 aa11.32□□□□□ -0.6
COL12A1-205ENST00000425443 ZFP36L1Q07352 338 aaKnown RBP11.32□□□□□ -0.6
COL12A1-205ENST00000425443 PEG10Q86TG7 708 aaKnown RBP11.32□□□□□ -0.6
COL12A1-205ENST00000425443 SSC4DQ8WTU2 575 aa11.32□□□□□ -0.6
COL12A1-205ENST00000425443 RNF141Q8WVD5 230 aa11.32□□□□□ -0.6
COL12A1-205ENST00000425443 CARHSP1Q9Y2V2 147 aaKnown RBP11.32□□□□□ -0.6
COL12A1-205ENST00000425443 EREGO14944 169 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 DHRS3O75911 302 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 TMEM225BP0DP42 221 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 ZNF14P17017 642 aaPredicted RBP11.31□□□□□ -0.6
COL12A1-205ENST00000425443 ENDOGQ14249 297 aaKnown RBP11.31□□□□□ -0.6
COL12A1-205ENST00000425443 GAMTQ14353 236 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 UBE2V2Q15819 145 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 ZNF239Q16600 458 aaKnown RBP11.31□□□□□ -0.6
COL12A1-205ENST00000425443 PNLIPRP3Q17RR3 467 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 VAX1Q5SQQ9 334 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 DHRS7BQ6IAN0 325 aaPredicted RBP11.31□□□□□ -0.6
COL12A1-205ENST00000425443 LHFPL1Q86WI0 220 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 POC1AQ8NBT0 407 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 RHBDD1Q8TEB9 315 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 SGCZQ96LD1 299 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 CDC6Q99741 560 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 A0A1B0GV50 99 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 CEACAM18A8MTB9 384 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 CYTIPO60759 359 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 LRP3O75074 770 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 SERPINA5P05154 406 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 LYL1P12980 280 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 SPINK2P20155 84 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 IL15RAQ13261 267 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 TAF9Q16594 264 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 PRSS54Q6PEW0 395 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 ARL11Q969Q4 196 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 PROK2Q9HC23 129 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 LPAR3Q9UBY5 353 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 OSGIN2Q9Y236 505 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 HPNP05981 417 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 BMI1P35226 326 aa11.31□□□□□ -0.6
COL12A1-205ENST00000425443 TAS2R31P59538 309 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms