RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 OR8B8Q15620 311 aa9.98□□□□□ -0.81
UBR4-207ENST00000425413 TMEM42Q69YG0 159 aa9.98□□□□□ -0.81
UBR4-207ENST00000425413 NEK7Q8TDX7 302 aa9.98□□□□□ -0.81
UBR4-207ENST00000425413 TMEM45BQ96B21 275 aa9.98□□□□□ -0.81
UBR4-207ENST00000425413 MRPS24Q96EL2 167 aaKnown RBP9.98□□□□□ -0.81
UBR4-207ENST00000425413 C1QTNF5Q9BXJ0 243 aa9.98□□□□□ -0.81
UBR4-207ENST00000425413 FGF23Q9GZV9 251 aaPredicted RBP9.98□□□□□ -0.81
UBR4-207ENST00000425413 SHARPINQ9H0F6 387 aa9.98□□□□□ -0.81
UBR4-207ENST00000425413 BCO1Q9HAY6 547 aa9.98□□□□□ -0.81
UBR4-207ENST00000425413 PTPRZ1P23471 2315 aaPredicted RBP9.97□□□□□ -0.81
UBR4-207ENST00000425413 CDK2AP1O14519 115 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 XRCC2O43543 280 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 CCL11P51671 97 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 PIGPP57054 158 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 SRSF4Q08170 494 aaKnown RBP9.97□□□□□ -0.81
UBR4-207ENST00000425413 CLEC9AQ6UXN8 241 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 OR5L1Q8NGL2 311 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 OR11L1Q8NGX0 322 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 ASB13Q8WXK3 278 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 ZNF552Q9H707 407 aaPredicted RBP9.97□□□□□ -0.81
UBR4-207ENST00000425413 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.97□□□□□ -0.81
UBR4-207ENST00000425413 SPENQ96T58 3664 aaKnown RBP9.97□□□□□ -0.81
UBR4-207ENST00000425413 KLRC4-KLRK1H3BQV0 150 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 IFNA2P01563 188 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 MALLQ13021 153 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 IAH1Q2TAA2 248 aaPredicted RBP9.97□□□□□ -0.81
UBR4-207ENST00000425413 KRTAP27-1Q3LI81 207 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 HSD17B13Q7Z5P4 300 aaPredicted RBP9.97□□□□□ -0.81
UBR4-207ENST00000425413 TMED6Q8WW62 240 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 CPNE2Q96FN4 548 aaPredicted RBP9.97□□□□□ -0.81
UBR4-207ENST00000425413 LOXL4Q96JB6 756 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 FER1L6-AS2Q96M78 137 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 SLC25A32Q9H2D1 315 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 ASF1BQ9NVP2 202 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 MED9Q9NWA0 146 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 RASL12Q9NYN1 266 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 PRELID1Q9Y255 219 aa9.97□□□□□ -0.81
UBR4-207ENST00000425413 KLF13Q9Y2Y9 288 aaPredicted RBP9.97□□□□□ -0.81
UBR4-207ENST00000425413 A0A1B0GW55 424 aa9.96□□□□□ -0.81
UBR4-207ENST00000425413 ZNF732B4DXR9 585 aa9.96□□□□□ -0.81
UBR4-207ENST00000425413 ZNF806P0C7X5 589 aa9.96□□□□□ -0.81
UBR4-207ENST00000425413 DUX4L2P0CJ85 424 aa9.96□□□□□ -0.81
UBR4-207ENST00000425413 DUX4L3P0CJ86 424 aa9.96□□□□□ -0.81
UBR4-207ENST00000425413 DUX4L4P0CJ87 422 aa9.96□□□□□ -0.81
UBR4-207ENST00000425413 DUX4L5P0CJ88 424 aa9.96□□□□□ -0.81
UBR4-207ENST00000425413 DUX4L6P0CJ89 424 aa9.96□□□□□ -0.81
UBR4-207ENST00000425413 DUX4L7P0CJ90 424 aa9.96□□□□□ -0.81
UBR4-207ENST00000425413 CD46P15529 392 aa9.96□□□□□ -0.81
UBR4-207ENST00000425413 EIF3IQ13347 325 aaKnown RBP9.96□□□□□ -0.81
UBR4-207ENST00000425413 ABCA11PQ4W5N1 156 aa9.96□□□□□ -0.81
UBR4-207ENST00000425413 IGSF11Q5DX21 431 aa9.96□□□□□ -0.81
UBR4-207ENST00000425413 Q6ZPA2 131 aa9.96□□□□□ -0.81
UBR4-207ENST00000425413 SGPP2Q8IWX5 399 aa9.96□□□□□ -0.81
UBR4-207ENST00000425413 MRPL24Q96A35 216 aaKnown RBP9.96□□□□□ -0.81
UBR4-207ENST00000425413 ARPC5LQ9BPX5 153 aa9.96□□□□□ -0.81
UBR4-207ENST00000425413 RGCCQ9H4X1 137 aa9.96□□□□□ -0.81
UBR4-207ENST00000425413 DUX4Q9UBX2 424 aa9.96□□□□□ -0.81
UBR4-207ENST00000425413 CEACAM18A8MTB9 384 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 BET1O15155 118 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 NME2P1O60361 137 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 ZNF728P0DKX0 622 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 NME2P22392 152 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 RBM11P57052 281 aaKnown RBP9.96□□□□□ -0.82
UBR4-207ENST00000425413 ARL6IP1Q15041 203 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 TSC22D1Q15714 1073 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 ZNF766Q5HY98 468 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 CCDC54Q8NEL0 328 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 HPSE2Q8WWQ2 592 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 SMIM3Q9BZL3 60 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 RAB18Q9NP72 206 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 NECAP2Q9NVZ3 263 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 SPRR3Q9UBC9 169 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 LSM5Q9Y4Y9 91 aaKnown RBP9.96□□□□□ -0.82
UBR4-207ENST00000425413 LINC01387J3KSC0 135 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 SYNGR1O43759 233 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 PDCD6O75340 191 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 PLP2Q04941 152 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 SNTB1Q13884 538 aaKnown RBP9.96□□□□□ -0.82
UBR4-207ENST00000425413 RBM39Q14498 530 aaKnown RBP9.96□□□□□ -0.82
UBR4-207ENST00000425413 ZNF345Q14585 488 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 ZNF585AQ6P3V2 769 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 C17orf78Q8N4C9 275 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 MDS2Q8NDY4 140 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 BPIFCQ8NFQ6 507 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 NMES1Q9C002 83 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 PRDM14Q9GZV8 571 aa9.96□□□□□ -0.82
UBR4-207ENST00000425413 TRGV5A0A0B4J1U4 118 aa9.95□□□□□ -0.82
UBR4-207ENST00000425413 ATP6V1G2-DDX39BF2Z307 99 aa9.95□□□□□ -0.82
UBR4-207ENST00000425413 OR5AC1P0C628 307 aa9.95□□□□□ -0.82
UBR4-207ENST00000425413 CYCSP99999 105 aaKnown RBP9.95□□□□□ -0.82
UBR4-207ENST00000425413 OR2T2Q6IF00 324 aa9.95□□□□□ -0.82
UBR4-207ENST00000425413 HAGHLQ6PII5 290 aaPredicted RBP9.95□□□□□ -0.82
UBR4-207ENST00000425413 LRRC46Q96FV0 321 aa9.95□□□□□ -0.82
UBR4-207ENST00000425413 C2orf50Q96LR7 162 aa9.95□□□□□ -0.82
UBR4-207ENST00000425413 REPIN1Q9BWE0 567 aaKnown RBP9.95□□□□□ -0.82
UBR4-207ENST00000425413 SLC22A20A6NK97 555 aa9.95□□□□□ -0.82
UBR4-207ENST00000425413 DIRAS3O95661 229 aa9.95□□□□□ -0.82
UBR4-207ENST00000425413 DAZAP2Q15038 168 aaPredicted RBP9.95□□□□□ -0.82
UBR4-207ENST00000425413 OR2A2Q6IF42 318 aa9.95□□□□□ -0.82
UBR4-207ENST00000425413 MEX3BQ6ZN04 569 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms