RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 WIPF2Q8TF74 440 aaPredicted RBP9.83□□□□□ -0.84
HLA-DQB3-203ENST00000425319 C10orf35Q96D05 121 aa9.83□□□□□ -0.84
HLA-DQB3-203ENST00000425319 NSL1Q96IY1 281 aa9.83□□□□□ -0.84
HLA-DQB3-203ENST00000425319 RBM14Q96PK6 669 aaKnown RBP9.83□□□□□ -0.84
HLA-DQB3-203ENST00000425319 KLHDC2Q9Y2U9 406 aa9.83□□□□□ -0.84
HLA-DQB3-203ENST00000425319 CMYA5Q8N3K9 4069 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 PLXNB1O43157 2135 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 INMTO95050 263 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 IGLV3-1P01715 115 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 ERP29P30040 261 aaKnown RBP9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 ATP6V1E1P36543 226 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 MYCNOSP40205 109 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 RBP2P50120 134 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 CXCR4P61073 352 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 ERVK11-1P61568 191 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 DGCR2P98153 550 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 BDH1Q02338 343 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 TMEM42Q69YG0 159 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 BATF2Q8N1L9 274 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 OSR2Q8N2R0 312 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 COMMD1Q8N668 190 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 YIPF7Q8N8F6 280 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 OR14K1Q8NGZ2 314 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 CHPT1Q8WUD6 406 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 HRASLS5Q96KN8 279 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 GON7Q9BXV9 100 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 ARL8BQ9NVJ2 186 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 VNN3Q9NY84 501 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 TAS2R3Q9NYW6 316 aa9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 AMMECR1Q9Y4X0 333 aaPredicted RBP9.82□□□□□ -0.84
HLA-DQB3-203ENST00000425319 TCRBV5S2A0A599 114 aa9.81□□□□□ -0.84
HLA-DQB3-203ENST00000425319 ZNF737O75373 536 aa9.81□□□□□ -0.84
HLA-DQB3-203ENST00000425319 ZFPL1O95159 310 aa9.81□□□□□ -0.84
HLA-DQB3-203ENST00000425319 PRKACBP22694 351 aa9.81□□□□□ -0.84
HLA-DQB3-203ENST00000425319 CRISP1P54107 249 aa9.81□□□□□ -0.84
HLA-DQB3-203ENST00000425319 EGFEM1PQ0D2K5 195 aa9.81□□□□□ -0.84
HLA-DQB3-203ENST00000425319 SPIN3Q5JUX0 258 aa9.81□□□□□ -0.84
HLA-DQB3-203ENST00000425319 Q6ZS46 218 aa9.81□□□□□ -0.84
HLA-DQB3-203ENST00000425319 SLC25A26Q70HW3 274 aa9.81□□□□□ -0.84
HLA-DQB3-203ENST00000425319 MEPCEQ7L2J0 689 aaKnown RBP9.81□□□□□ -0.84
HLA-DQB3-203ENST00000425319 RNF144BQ7Z419 303 aa9.81□□□□□ -0.84
HLA-DQB3-203ENST00000425319 SLC35F2Q8IXU6 374 aa9.81□□□□□ -0.84
HLA-DQB3-203ENST00000425319 FAM58AQ8N1B3 248 aa9.81□□□□□ -0.84
HLA-DQB3-203ENST00000425319 SLAMF9Q96A28 289 aa9.81□□□□□ -0.84
HLA-DQB3-203ENST00000425319 ASB9Q96DX5 294 aa9.81□□□□□ -0.84
HLA-DQB3-203ENST00000425319 APOL4Q9BPW4 351 aa9.81□□□□□ -0.84
HLA-DQB3-203ENST00000425319 SLC25A19Q9HC21 320 aa9.81□□□□□ -0.84
HLA-DQB3-203ENST00000425319 INPP5EQ9NRR6 644 aa9.81□□□□□ -0.84
HLA-DQB3-203ENST00000425319 WI2-2373I1.2A0A1W2PRP0 233 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 MEX3AA1L020 520 aaKnown RBP9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 A6NIN4 97 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 AQP12BA6NM10 295 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 PRKACAP17612 351 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 SLC2A5P22732 501 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 CDK2P24941 298 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 HOXD3P31249 432 aaPredicted RBP9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 P2RX3P56373 397 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 BNIP1Q12981 228 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 TMEM95Q3KNT9 176 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 C11orf87Q6NUJ2 197 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 HEPN1Q6WQI6 88 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 THNSL2Q86YJ6 484 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 GID4Q8IVV7 300 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 FOXRED2Q8IWF2 684 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 AQP12AQ8IXF9 295 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 ZNF565Q8N9K5 539 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 DNAAF1Q8NEP3 725 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 BBS1Q8NFJ9 593 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 PP6455Q8WZ26 134 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 RPEQ96AT9 228 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 MYCBPQ99417 103 aaPredicted RBP9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 CADM1Q9BY67 442 aaKnown RBP9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 CHST6Q9GZX3 395 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 EXOSC4Q9NPD3 245 aaKnown RBP9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 CLN6Q9NWW5 311 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 CHCHD3Q9NX63 227 aaKnown RBP9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 MTCH1Q9NZJ7 389 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 ENOPH1Q9UHY7 261 aa9.8□□□□□ -0.84
HLA-DQB3-203ENST00000425319 SERPINE3A8MV23 424 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 RPP14O95059 124 aaKnown RBP9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 PRKACGP22612 351 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 CALB2P22676 271 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 MTCP1P56278 107 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 SCN1BQ07699 218 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 HES1Q14469 280 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 RBM39Q14498 530 aaKnown RBP9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 ODF4Q2M2E3 257 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 NXNL2Q5VZ03 156 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 TMEM236Q5W0B7 351 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 FAM220AQ7Z4H9 259 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 TPRX1Q8N7U7 411 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 BCAS4Q8TDM0 211 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 CORO2AQ92828 525 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 NRBF2Q96F24 287 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 TTTY10Q9BZA0 68 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 RHOFQ9HBH0 211 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 OR6C3Q9NZP0 311 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 MOB4Q9Y3A3 225 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 SIRT4Q9Y6E7 314 aaPredicted RBP9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 HSPE1-MOB4S4R3N1 261 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms