RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 BPIFB3P59826 476 aa18.35■□□□□ 0.53
PTCHD3P2-201ENST00000424937 RPL31P62899 125 aaKnown RBP18.35■□□□□ 0.53
PTCHD3P2-201ENST00000424937 BAMBIQ13145 260 aa18.35■□□□□ 0.53
PTCHD3P2-201ENST00000424937 OR4M1Q8NGD0 313 aa18.35■□□□□ 0.53
PTCHD3P2-201ENST00000424937 CPNE2Q96FN4 548 aaPredicted RBP18.35■□□□□ 0.53
PTCHD3P2-201ENST00000424937 PGLYRP3Q96LB9 341 aa18.35■□□□□ 0.53
PTCHD3P2-201ENST00000424937 DUX5Q96PT3 197 aa18.35■□□□□ 0.53
PTCHD3P2-201ENST00000424937 FAM234AQ9H0X4 552 aa18.35■□□□□ 0.53
PTCHD3P2-201ENST00000424937 K7N7A8 449 aa18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 M0R1W7 72 aa18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 MAGEB3O15480 346 aa18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 TMEM225BP0DP42 221 aa18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 HSPA13P48723 471 aa18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 ZP1P60852 638 aa18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 UBA52P62987 128 aaKnown RBP18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 KLRD1Q13241 179 aa18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 BLMHQ13867 455 aa18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 DOC2BQ14184 412 aa18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 DEFB112Q30KQ8 113 aa18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 ZNF529Q6P280 563 aa18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 SATL1Q86VE3 508 aa18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 SAXO1Q8IYX7 474 aa18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 NANOGP1Q8N7R0 232 aa18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 MYDGFQ969H8 173 aa18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 GPER1Q99527 375 aa18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 HMG20AQ9NP66 347 aa18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 PAK1IP1Q9NWT1 392 aaPredicted RBP18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 GSTK1Q9Y2Q3 226 aa18.34■□□□□ 0.53
PTCHD3P2-201ENST00000424937 TRBV5-5A0A0J9YX44 114 aa18.33■□□□□ 0.52
PTCHD3P2-201ENST00000424937 ZNF737O75373 536 aa18.33■□□□□ 0.52
PTCHD3P2-201ENST00000424937 KDM4BO94953 1096 aa18.33■□□□□ 0.52
PTCHD3P2-201ENST00000424937 PPP3R1P63098 170 aa18.33■□□□□ 0.52
PTCHD3P2-201ENST00000424937 ACTG1P63261 375 aa18.33■□□□□ 0.52
PTCHD3P2-201ENST00000424937 RIPK1Q13546 671 aa18.33■□□□□ 0.52
PTCHD3P2-201ENST00000424937 ZNF146Q15072 292 aa18.33■□□□□ 0.52
PTCHD3P2-201ENST00000424937 YIF1BQ5BJH7 314 aa18.33■□□□□ 0.52
PTCHD3P2-201ENST00000424937 SPIN3Q5JUX0 258 aa18.33■□□□□ 0.52
PTCHD3P2-201ENST00000424937 GDPD3Q7L5L3 318 aa18.33■□□□□ 0.52
PTCHD3P2-201ENST00000424937 SGCDQ92629 289 aa18.33■□□□□ 0.52
PTCHD3P2-201ENST00000424937 ZDHHC16Q969W1 377 aa18.33■□□□□ 0.52
PTCHD3P2-201ENST00000424937 ORAI1Q96D31 301 aa18.33■□□□□ 0.52
PTCHD3P2-201ENST00000424937 MND1Q9BWT6 205 aa18.33■□□□□ 0.52
PTCHD3P2-201ENST00000424937 METTL8Q9H825 291 aaKnown RBP18.33■□□□□ 0.52
PTCHD3P2-201ENST00000424937 GLS2Q9UI32 602 aa18.33■□□□□ 0.52
PTCHD3P2-201ENST00000424937 RNASEK-C17orf49H0YIS7 233 aa18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 CELP19835 753 aa18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 GABRR1P24046 479 aa18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 EDDM3BP56851 147 aa18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 RPS11P62280 158 aaKnown RBP eCLIP18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 Q499Y3 187 aa18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 METAP1DQ6UB28 335 aaPredicted RBP18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 OR8H2Q8N162 312 aa18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 ZSCAN4Q8NAM6 433 aaPredicted RBP18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 OR52N4Q8NGI2 321 aa18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 FAM216AQ8WUB2 273 aa18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 SNX22Q96L94 193 aa18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 C1orf147Q96MC9 270 aaPredicted RBP18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 OR14A2Q96R54 314 aa18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 NKX3-1Q99801 234 aaPredicted RBP18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 FAM192AQ9GZU8 254 aa18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 CHST6Q9GZX3 395 aa18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 EXOSC4Q9NPD3 245 aaKnown RBP18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 TPRKBQ9Y3C4 175 aa18.32■□□□□ 0.52
PTCHD3P2-201ENST00000424937 A0A1W2PPH5 198 aa18.31■□□□□ 0.52
PTCHD3P2-201ENST00000424937 TMEM82A0PJX8 343 aa18.31■□□□□ 0.52
PTCHD3P2-201ENST00000424937 SIRPB1O00241 398 aa18.31■□□□□ 0.52
PTCHD3P2-201ENST00000424937 GABRPO00591 440 aa18.31■□□□□ 0.52
PTCHD3P2-201ENST00000424937 GUCA2AQ02747 115 aa18.31■□□□□ 0.52
PTCHD3P2-201ENST00000424937 EDDM3AQ14507 147 aa18.31■□□□□ 0.52
PTCHD3P2-201ENST00000424937 ZNF273Q14593 569 aa18.31■□□□□ 0.52
PTCHD3P2-201ENST00000424937 DDI2Q5TDH0 399 aa18.31■□□□□ 0.52
PTCHD3P2-201ENST00000424937 RNLSQ5VYX0 342 aa18.31■□□□□ 0.52
PTCHD3P2-201ENST00000424937 TMEM200BQ69YZ2 307 aa18.31■□□□□ 0.52
PTCHD3P2-201ENST00000424937 C1orf122Q6ZSJ8 110 aa18.31■□□□□ 0.52
PTCHD3P2-201ENST00000424937 TNFAIP8L1Q8WVP5 186 aa18.31■□□□□ 0.52
PTCHD3P2-201ENST00000424937 CDCA4Q9BXL8 241 aa18.31■□□□□ 0.52
PTCHD3P2-201ENST00000424937 RHOFQ9HBH0 211 aa18.31■□□□□ 0.52
PTCHD3P2-201ENST00000424937 TMEM138Q9NPI0 162 aa18.31■□□□□ 0.52
PTCHD3P2-201ENST00000424937 PCDHGB5Q9Y5G0 923 aa18.31■□□□□ 0.52
PTCHD3P2-201ENST00000424937 A0A1W2PRD5 423 aa18.3■□□□□ 0.52
PTCHD3P2-201ENST00000424937 A0A1W2PRF3 423 aa18.3■□□□□ 0.52
PTCHD3P2-201ENST00000424937 A0A1W2PRM7 423 aa18.3■□□□□ 0.52
PTCHD3P2-201ENST00000424937 CCL3L1P16619 93 aa18.3■□□□□ 0.52
PTCHD3P2-201ENST00000424937 PRTN3P24158 256 aa18.3■□□□□ 0.52
PTCHD3P2-201ENST00000424937 BDKRB2P30411 391 aa18.3■□□□□ 0.52
PTCHD3P2-201ENST00000424937 SLC35A2P78381 396 aa18.3■□□□□ 0.52
PTCHD3P2-201ENST00000424937 GRK1Q15835 563 aa18.3■□□□□ 0.52
PTCHD3P2-201ENST00000424937 NCR3LG1Q68D85 454 aa18.3■□□□□ 0.52
PTCHD3P2-201ENST00000424937 C17orf107Q6ZR85 190 aa18.3■□□□□ 0.52
PTCHD3P2-201ENST00000424937 TBC1D15Q8TC07 691 aa18.3■□□□□ 0.52
PTCHD3P2-201ENST00000424937 CNBD2Q96M20 576 aa18.3■□□□□ 0.52
PTCHD3P2-201ENST00000424937 UNKLQ9H9P5 680 aaKnown RBP18.3■□□□□ 0.52
PTCHD3P2-201ENST00000424937 ZMAT3Q9HA38 289 aaKnown RBP18.3■□□□□ 0.52
PTCHD3P2-201ENST00000424937 SEBOXQ9HB31 216 aaPredicted RBP18.3■□□□□ 0.52
PTCHD3P2-201ENST00000424937 CKLFQ9UBR5 152 aa18.3■□□□□ 0.52
PTCHD3P2-201ENST00000424937 KIAA2026Q5HYC2 2103 aa18.29■□□□□ 0.52
PTCHD3P2-201ENST00000424937 A0A0U1RQK1 487 aa18.29■□□□□ 0.52
PTCHD3P2-201ENST00000424937 MEX3AA1L020 520 aaKnown RBP18.29■□□□□ 0.52
PTCHD3P2-201ENST00000424937 SH2D1BO14796 132 aa18.29■□□□□ 0.52
PTCHD3P2-201ENST00000424937 OR2H2O95918 312 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms