RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 NANOGP1Q8N7R0 232 aa12.41□□□□□ -0.42
USB1-202ENST00000423271 OR51A4Q8NGJ6 313 aa12.41□□□□□ -0.42
USB1-202ENST00000423271 OR5AK2Q8NH90 309 aa12.41□□□□□ -0.42
USB1-202ENST00000423271 RPS4Y2Q8TD47 263 aa12.41□□□□□ -0.42
USB1-202ENST00000423271 C17orf50Q8WW18 174 aa12.41□□□□□ -0.42
USB1-202ENST00000423271 DPAGT1Q9H3H5 408 aa12.41□□□□□ -0.42
USB1-202ENST00000423271 Q9H521 79 aa12.41□□□□□ -0.42
USB1-202ENST00000423271 DUSP21Q9H596 190 aa12.41□□□□□ -0.42
USB1-202ENST00000423271 PLEKHA1Q9HB21 404 aa12.41□□□□□ -0.42
USB1-202ENST00000423271 HES4Q9HCC6 221 aa12.41□□□□□ -0.42
USB1-202ENST00000423271 BABAM2Q9NXR7 383 aa12.41□□□□□ -0.42
USB1-202ENST00000423271 HHLA2Q9UM44 414 aa12.41□□□□□ -0.42
USB1-202ENST00000423271 POLDIP2Q9Y2S7 368 aa12.41□□□□□ -0.42
USB1-202ENST00000423271 CLPSL1A2RUU4 121 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 TMEM212A6NML5 194 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 OGG1O15527 345 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 MT-ND2P03891 347 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 PRDX2P32119 198 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 UBE2E1P51965 193 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 WNT4P56705 351 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 KRTAP10-3P60369 221 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 RPL15P61313 204 aaKnown RBP12.4□□□□□ -0.42
USB1-202ENST00000423271 BLMHQ13867 455 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 UBE2V2Q15819 145 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 CCDC58Q4VC31 144 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 RNLSQ5VYX0 342 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 NCR3LG1Q68D85 454 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 C17orf107Q6ZR85 190 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 ZFP41Q8N8Y5 198 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 FGGYQ96C11 551 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 ADAT3Q96EY9 351 aaPredicted RBP12.4□□□□□ -0.42
USB1-202ENST00000423271 CDCA4Q9BXL8 241 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 COMMD4Q9H0A8 199 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 OR14J1Q9UGF5 321 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 VPREB3Q9UKI3 123 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 ERGIC3Q9Y282 383 aa12.4□□□□□ -0.42
USB1-202ENST00000423271 IGKV1-27A0A075B6S5 117 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 FAM230AA0A1W2PPH8 454 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 F8VVB4 439 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 F8VWA3 439 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 WIPF1O43516 503 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 RGS10O43665 173 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 ANGPTL7O43827 346 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 PAHP00439 452 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 ERVK11-1P61568 191 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 RPL31P62899 125 aaKnown RBP12.39□□□□□ -0.43
USB1-202ENST00000423271 IRF3Q14653 427 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 RBM48Q5RL73 367 aaKnown RBP12.39□□□□□ -0.43
USB1-202ENST00000423271 TREML4Q6UXN2 200 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 GDPGP1Q6ZNW5 385 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 Q6ZSV7 163 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 MKXQ8IYA7 352 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 ZNF561Q8N587 486 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 OR4M1Q8NGD0 313 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 OR13C3Q8NGS6 347 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 LINC01006Q8NI28 216 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 RGP1Q92546 391 aaPredicted RBP12.39□□□□□ -0.43
USB1-202ENST00000423271 PKIBQ9C010 78 aa12.39□□□□□ -0.43
USB1-202ENST00000423271 VWFP04275 2813 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 PNMA8CA0A1B0GUJ8 204 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 CCL3L1P16619 93 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 ZNF20P17024 532 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 PAX6P26367 422 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 ERVFRD-1P60508 538 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 IL24Q13007 206 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 ZNF273Q14593 569 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 TMEM200BQ69YZ2 307 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 DMKNQ6E0U4 476 aaPredicted RBP12.38□□□□□ -0.43
USB1-202ENST00000423271 DHRS7BQ6IAN0 325 aaPredicted RBP12.38□□□□□ -0.43
USB1-202ENST00000423271 BRICD5Q6PL45 260 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 OR5D13Q8NGL4 314 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 TSEN15Q8WW01 171 aaKnown RBP12.38□□□□□ -0.43
USB1-202ENST00000423271 C10orf35Q96D05 121 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 SMIM19Q96E16 107 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 AJUBAQ96IF1 538 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 OR5M11Q96RB7 305 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 CITED1Q99966 193 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 MND1Q9BWT6 205 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 CHST5Q9GZS9 411 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 CCDC90BQ9GZT6 254 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 MTCH1Q9NZJ7 389 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 SLC7A11Q9UPY5 501 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 LSM2Q9Y333 95 aaKnown RBP12.38□□□□□ -0.43
USB1-202ENST00000423271 RNF114Q9Y508 228 aa12.38□□□□□ -0.43
USB1-202ENST00000423271 PRKDCP78527 4128 aaKnown RBP12.38□□□□□ -0.43
USB1-202ENST00000423271 MEX3AA1L020 520 aaKnown RBP12.37□□□□□ -0.43
USB1-202ENST00000423271 BTBD17A6NE02 478 aa12.37□□□□□ -0.43
USB1-202ENST00000423271 INMTO95050 263 aa12.37□□□□□ -0.43
USB1-202ENST00000423271 TK1P04183 234 aa12.37□□□□□ -0.43
USB1-202ENST00000423271 TAS2R43P59537 309 aa12.37□□□□□ -0.43
USB1-202ENST00000423271 COL10A1Q03692 680 aa12.37□□□□□ -0.43
USB1-202ENST00000423271 ACSM1Q08AH1 577 aa12.37□□□□□ -0.43
USB1-202ENST00000423271 C11orf42Q8N5U0 333 aa12.37□□□□□ -0.43
USB1-202ENST00000423271 ZSCAN4Q8NAM6 433 aaPredicted RBP12.37□□□□□ -0.43
USB1-202ENST00000423271 BEND2Q8NDZ0 799 aa12.37□□□□□ -0.43
USB1-202ENST00000423271 OR13C5Q8NGS8 318 aa12.37□□□□□ -0.43
USB1-202ENST00000423271 PP6455Q8WZ26 134 aa12.37□□□□□ -0.43
USB1-202ENST00000423271 SLAMF9Q96A28 289 aa12.37□□□□□ -0.43
USB1-202ENST00000423271 BLOC1S6Q9UL45 172 aa12.37□□□□□ -0.43
USB1-202ENST00000423271 DHDHQ9UQ10 334 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms