RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 DUX4L3P0CJ86 424 aa6.36□□□□□ -1.39
BDNF-209ENST00000420794 DUX4L4P0CJ87 422 aa6.36□□□□□ -1.39
BDNF-209ENST00000420794 DUX4L5P0CJ88 424 aa6.36□□□□□ -1.39
BDNF-209ENST00000420794 DUX4L6P0CJ89 424 aa6.36□□□□□ -1.39
BDNF-209ENST00000420794 DUX4L7P0CJ90 424 aa6.36□□□□□ -1.39
BDNF-209ENST00000420794 ANXA3P12429 323 aa6.36□□□□□ -1.39
BDNF-209ENST00000420794 DUSP1P28562 367 aa6.36□□□□□ -1.39
BDNF-209ENST00000420794 APOBEC3AP31941 199 aaPredicted RBP6.36□□□□□ -1.39
BDNF-209ENST00000420794 BAK1Q16611 211 aa6.36□□□□□ -1.39
BDNF-209ENST00000420794 NRARPQ7Z6K4 114 aa6.36□□□□□ -1.39
BDNF-209ENST00000420794 PRR18Q8N4B5 295 aa6.36□□□□□ -1.39
BDNF-209ENST00000420794 PAQR4Q8N4S7 273 aaPredicted RBP6.36□□□□□ -1.39
BDNF-209ENST00000420794 IL1F10Q8WWZ1 152 aa6.36□□□□□ -1.39
BDNF-209ENST00000420794 CNTNAP3BQ96NU0 1288 aa6.36□□□□□ -1.39
BDNF-209ENST00000420794 CNTNAP3Q9BZ76 1288 aa6.36□□□□□ -1.39
BDNF-209ENST00000420794 KCNK15Q9H427 330 aa6.36□□□□□ -1.39
BDNF-209ENST00000420794 COMMD9Q9P000 198 aa6.36□□□□□ -1.39
BDNF-209ENST00000420794 DUX4Q9UBX2 424 aa6.36□□□□□ -1.39
BDNF-209ENST00000420794 CHD8Q9HCK8 2581 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 B9A039 149 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 EDDM3BP56851 147 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 SORDQ00796 357 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 RBMS2Q15434 407 aaKnown RBP6.35□□□□□ -1.39
BDNF-209ENST00000420794 LINC00596Q86U02 117 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 MOGAT3Q86VF5 341 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 CCL17Q92583 94 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 WFIKKN1Q96NZ8 548 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 C11orf54Q9H0W9 315 aaPredicted RBP6.35□□□□□ -1.39
BDNF-209ENST00000420794 NUDT15Q9NV35 164 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 RNF7Q9UBF6 113 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 V9GYH0 126 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 EXPH5Q8NEV8 1989 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 SPTBN1Q01082 2364 aaKnown RBP6.35□□□□□ -1.39
BDNF-209ENST00000420794 H7C417 338 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 BCL3P20749 454 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 SNTB1Q13884 538 aaKnown RBP6.35□□□□□ -1.39
BDNF-209ENST00000420794 IGFBP7Q16270 282 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 TMEM185AQ8NFB2 350 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 CHPT1Q8WUD6 406 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 FBXW5Q969U6 566 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 OR2V2Q96R30 315 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 SLC25A21Q9BQT8 299 aaPredicted RBP6.35□□□□□ -1.39
BDNF-209ENST00000420794 OCSTAMPQ9BR26 566 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 RHOFQ9HBH0 211 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 NECAP2Q9NVZ3 263 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 KLK11Q9UBX7 282 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 MTFP1Q9UDX5 166 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.35□□□□□ -1.39
BDNF-209ENST00000420794 ANKRD34BA5PLL1 514 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 SHOXO15266 292 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 PRAF2O60831 178 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 MPV17P39210 176 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 EFNB2P52799 333 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 NKX2-5P52952 324 aaPredicted RBP6.35□□□□□ -1.39
BDNF-209ENST00000420794 FGF12P61328 243 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 EDDM3AQ14507 147 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 PRAMEF6Q5VXH4 476 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 MEX3BQ6ZN04 569 aaKnown RBP6.35□□□□□ -1.39
BDNF-209ENST00000420794 SLC36A1Q7Z2H8 476 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 RELL2Q8NC24 303 aaPredicted RBP6.35□□□□□ -1.39
BDNF-209ENST00000420794 TOMM40LQ969M1 308 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 MRPL24Q96A35 216 aaKnown RBP6.35□□□□□ -1.39
BDNF-209ENST00000420794 CREB3L1Q96BA8 519 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 BEX2Q9BXY8 128 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 BEX1Q9HBH7 125 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 ZNF69Q9UC07 566 aa6.35□□□□□ -1.39
BDNF-209ENST00000420794 INTS1Q8N201 2190 aaKnown RBP6.34□□□□□ -1.39
BDNF-209ENST00000420794 SPTAN1Q13813 2472 aaKnown RBP6.34□□□□□ -1.39
BDNF-209ENST00000420794 PIGBOS1A0A0B4J2F0 54 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 GEMIN2O14893 280 aaKnown RBP6.34□□□□□ -1.39
BDNF-209ENST00000420794 SOCS1O15524 211 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 SPINT2O43291 252 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 HNF1AP20823 631 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 CALCRP30988 508 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 MDH2P40926 338 aaKnown RBP6.34□□□□□ -1.39
BDNF-209ENST00000420794 ALDH3B1P43353 468 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 TAS2R31P59538 309 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 S100A12P80511 92 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 HGFACQ04756 655 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 IL24Q13007 206 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 IL13RA2Q14627 380 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 GUSBP1Q15486 140 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 RSPO1Q2MKA7 263 aaPredicted RBP6.34□□□□□ -1.39
BDNF-209ENST00000420794 FAM209AQ5JX71 171 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 IDO2Q6ZQW0 420 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 C6orf201Q7Z4U5 140 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 TMEM200AQ86VY9 491 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 CMTM1Q8IZ96 169 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 TMEM104Q8NE00 496 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 OR56B4Q8NH76 319 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 ZFAND1Q8TCF1 268 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 GCDHQ92947 438 aaPredicted RBP6.34□□□□□ -1.39
BDNF-209ENST00000420794 ERGIC1Q969X5 290 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 MARS2Q96GW9 593 aaKnown RBP6.34□□□□□ -1.39
BDNF-209ENST00000420794 DMRTA2Q96SC8 542 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 MYOZ1Q9NP98 299 aaPredicted RBP6.34□□□□□ -1.39
BDNF-209ENST00000420794 MEIKINA0A087WXM9 373 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 TRAV38-1A0A0B4J264 116 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 IGKV1-9A0A0C4DH69 117 aa6.34□□□□□ -1.39
BDNF-209ENST00000420794 FAM90A10PA6NDY2 464 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms