RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 CCL3P10147 92 aa13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 FOSL1P15407 271 aa13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 RAB5AP20339 215 aa13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 SULT1A1P50225 295 aa13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 S100A12P80511 92 aa13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 GNMTQ14749 295 aa13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 LIAT1Q6ZQX7 453 aa13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 GPHA2Q96T91 129 aa13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 FOLR2P14207 255 aa13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 B4GALT1P15291 398 aa13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 CCL7P80098 99 aa13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 SPIN3Q5JUX0 258 aa13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 LGI3Q8N145 548 aa13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 ALKBH3Q96Q83 286 aaPredicted RBP13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 SYT3Q9BQG1 590 aa13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 MAGT1Q9H0U3 335 aa13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 FREM2Q5SZK8 3169 aa13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 CELSR3Q9NYQ7 3312 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 OR7C1O76099 320 aaPredicted RBP13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 ONECUT2O95948 504 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 FADS6Q8N9I5 356 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 RARRES2Q99969 163 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 PBDC1Q9BVG4 233 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 ZNF700Q9H0M5 742 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 CRLF2Q9HC73 371 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 A0A1W2PQM1 296 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 FAM24AA6NFZ4 105 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 CDRT15L2A8MXV6 281 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 CA11O75493 328 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 CD63P08962 238 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 H3F3AP84243 136 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 CNN3Q15417 329 aaKnown RBP13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 C10orf128Q5T292 105 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 SLC35G3Q8N808 338 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 ZFP62Q8NB50 900 aaPredicted RBP13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 MAFAQ8NHW3 353 aaPredicted RBP13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 LYPD6BQ8NI32 183 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 PIGCQ92535 297 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 SPSB1Q96BD6 273 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 ZNF286AQ9HBT8 521 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 FSCN3Q9NQT6 498 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 ZDHHC8Q9ULC8 765 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 ZNHIT1O43257 154 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 NRASP01111 189 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 CHATP28329 748 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 HTR5AP47898 357 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 C5orf24Q7Z6I8 188 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 SUCNR1Q9BXA5 334 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 SLC35B3Q9H1N7 401 aa13.17□□□□□ -0.3
SEMA3B-203ENST00000419007 TRAV20A0A0B4J274 112 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 EIF1BO60739 113 aaKnown RBP13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 S100A8P05109 93 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 SOHLH1Q5JUK2 328 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 OSR2Q8N2R0 312 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 TMEM54Q969K7 222 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 TP53RKQ96S44 253 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 P4HTMQ9NXG6 502 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 DMDP11532 3685 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 IGKV1-12A0A0C4DH73 117 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 LOC102725191A0A1B0GVB3 256 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 IGKV1D-12P01611 117 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 AADACP22760 399 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 OTX1P32242 354 aaPredicted RBP13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 GPR157Q5UAW9 335 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 TMEM123Q8N131 208 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 SUMF2Q8NBJ7 301 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 OR1J1Q8NGS3 322 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 SLC39A7Q92504 469 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 CCDC74BQ96LY2 380 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 GINS3Q9BRX5 216 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 ABHD14AQ9BUJ0 271 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 EGLN1Q9GZT9 426 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 OCIAD1Q9NX40 245 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 ZNF407Q9C0G0 2248 aa13.16□□□□□ -0.3
SEMA3B-203ENST00000419007 A0A0J9YW62 118 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 IGHV5-10-1A0A0J9YXX1 117 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 H7C1Q1 480 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 SMIM6P0DI80 62 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 NCMAPQ5T1S8 102 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 OR2G3Q8NGZ4 309 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 GALNT14Q96FL9 552 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 UBE2J1Q9Y385 318 aaPredicted RBP13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 NKX2-6A6NCS4 301 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 UBE2CO00762 179 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 ZNF32P17041 273 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 AGAP20933 346 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 POLR2GP62487 172 aaKnown RBP eCLIP13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 MALLQ13021 153 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 RNF212Q495C1 297 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 IGSF11Q5DX21 431 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 PLCXD3Q63HM9 321 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 COMMD1Q8N668 190 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 TMEM217Q8N7C4 229 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 MSI2Q96DH6 328 aaKnown RBP13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 BCO1Q9HAY6 547 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 GSN-AS1Q9NRJ2 163 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 DECR2Q9NUI1 292 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 HSPB6O14558 160 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 DTYMKP23919 212 aa13.15□□□□□ -0.3
SEMA3B-203ENST00000419007 EWSR1Q01844 656 aaKnown RBP eCLIP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms