RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	NDUFB11	Q9NX14	153 aa		13.5	□□□□□ -0.25
DDR1-231	ENST00000417521	SLC25A10	Q9UBX3	287 aa	Predicted RBP	13.5	□□□□□ -0.25
DDR1-231	ENST00000417521	ZNF222	Q9UK12	451 aa		13.5	□□□□□ -0.25
DDR1-231	ENST00000417521	SLC7A11	Q9UPY5	501 aa		13.5	□□□□□ -0.25
DDR1-231	ENST00000417521	SOX21	Q9Y651	276 aa	Predicted RBP	13.5	□□□□□ -0.25
DDR1-231	ENST00000417521	IGKV1-27	A0A075B6S5	117 aa		13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	TRAV8-7	A0A075B6U6	113 aa		13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	SELL	P14151	372 aa		13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	AZGP1	P25311	298 aa	Known RBP	13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	GABRA5	P31644	462 aa		13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	GABRA2	P47869	451 aa		13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	FABP5	Q01469	135 aa		13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	CNN3	Q15417	329 aa	Known RBP	13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	SMIM21	Q3B7S5	101 aa		13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	SYT6	Q5T7P8	510 aa	Predicted RBP	13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	ACP7	Q6ZNF0	438 aa		13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	TMEM91	Q6ZNR0	172 aa		13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	RNF144B	Q7Z419	303 aa		13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	CEACAM19	Q7Z692	300 aa		13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	CMTM4	Q8IZR5	234 aa		13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	KIR3DL3	Q8N743	410 aa		13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	OR51A2	Q8NGJ7	313 aa		13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	SLC25A28	Q96A46	364 aa		13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	SDSL	Q96GA7	329 aa		13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	NOX4	Q9NPH5	578 aa		13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	MAB21L2	Q9Y586	359 aa		13.49	□□□□□ -0.25
DDR1-231	ENST00000417521	CCRL2	O00421	344 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	SULT1B1	O43704	296 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	SYNGR1	O43759	233 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	SC5D	O75845	299 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	RNASE1	P07998	156 aa	Known RBP	13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	OCM	P0CE72	109 aa	Predicted RBP	13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	FUT6	P51993	359 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	SLC9A3R2	Q15599	337 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	DEFB112	Q30KQ8	113 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	ZNF529	Q6P280	563 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	UNQ9370/PRO34162	Q6UXP9	181 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	C1orf122	Q6ZSJ8	110 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	ANGPTL5	Q86XS5	388 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	H1FX	Q92522	213 aa	Known RBP	13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	LHX4	Q969G2	390 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	DUX5	Q96PT3	197 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	SPACA5	Q96QH8	159 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	NRIP2	Q9BQI9	281 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	PKIB	Q9C010	78 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	PPIL3	Q9H2H8	161 aa	Known RBP	13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	VCX3A	Q9NNX9	186 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	IGHV1-69D	A0A0B4J2H0	117 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	IGHV1-69	P01742	117 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	TFF1	P04155	84 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	NDUFB7	P17568	137 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	IGFBP3	P17936	291 aa	Predicted RBP	13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	RAB3A	P20336	220 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	PRKACB	P22694	351 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	TGFBR2	P37173	567 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	IL24	Q13007	206 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	METAP1D	Q6UB28	335 aa	Predicted RBP	13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	CALHM1	Q8IU99	346 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	ZNRF1	Q8ND25	227 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	ZDHHC16	Q969W1	377 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	BORCS8	Q96FH0	119 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	ZNF488	Q96MN9	340 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	ONECUT1	Q9UBC0	465 aa		13.48	□□□□□ -0.25
DDR1-231	ENST00000417521	MAGEA13P	A6NCF6	341 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	RFPL4A	A6NLU0	287 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	RFPL4AL1	F8VTS6	287 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	HAX1	O00165	279 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	GABRP	O00591	440 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	NXPH2	O95156	264 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	HCK	P08631	526 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	HKR1	P10072	659 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	JUNB	P17275	347 aa	Predicted RBP	13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	PSMA1	P25786	263 aa	Known RBP	13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	MAPK3	P27361	379 aa	Predicted RBP	13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	PRDX2	P32119	198 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	RBP2	P50120	134 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	MTCP1	P56278	107 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	ERVK11-1	P61568	191 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	PPP3R1	P63098	170 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	TRAM1	Q15629	374 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	RUSC1-AS1	Q66K80	236 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521		Q6YL49	198 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	VMO1	Q7Z5L0	202 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	DNAAF1	Q8NEP3	725 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	RFT1	Q96AA3	541 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	SPSB1	Q96BD6	273 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	NKX3-1	Q99801	234 aa	Predicted RBP	13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	HES4	Q9HCC6	221 aa		13.47	□□□□□ -0.25
DDR1-231	ENST00000417521	TRBV23-1	A0A0A0MS06	115 aa		13.46	□□□□□ -0.25
DDR1-231	ENST00000417521	MDFIC2	A0A1B0GVS7	189 aa		13.46	□□□□□ -0.25
DDR1-231	ENST00000417521		M0R1W7	72 aa		13.46	□□□□□ -0.25
DDR1-231	ENST00000417521	GPX5	O75715	221 aa		13.46	□□□□□ -0.25
DDR1-231	ENST00000417521	ALX3	O95076	343 aa		13.46	□□□□□ -0.25
DDR1-231	ENST00000417521	FST	P19883	344 aa		13.46	□□□□□ -0.25
DDR1-231	ENST00000417521	CFP	P27918	469 aa		13.46	□□□□□ -0.25
DDR1-231	ENST00000417521	FOXL1	Q12952	345 aa		13.46	□□□□□ -0.25
DDR1-231	ENST00000417521	C16orf87	Q6PH81	154 aa		13.46	□□□□□ -0.25
DDR1-231	ENST00000417521	CRIP3	Q6Q6R5	217 aa		13.46	□□□□□ -0.25
DDR1-231	ENST00000417521	ZNF561	Q8N587	486 aa		13.46	□□□□□ -0.25
DDR1-231	ENST00000417521	CD177	Q8N6Q3	437 aa		13.46	□□□□□ -0.25

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