RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 OSR2Q8N2R0 312 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 HSD17B11Q8NBQ5 300 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 ABHD3Q8WU67 409 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 CLCC1Q96S66 551 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 C20orf24Q9BUV8 137 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 PARP11Q9NR21 331 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 PRRC2CQ9Y520 2896 aaKnown RBP12.54□□□□□ -0.4
HDAC9-208ENST00000417496 ZNF716A6NP11 495 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 PHF1O43189 567 aaPredicted RBP12.53□□□□□ -0.4
HDAC9-208ENST00000417496 CCL2P13500 99 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 DAOP14920 347 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 CLDN15P56746 228 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 SKA3Q8IX90 412 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 OR2Y1Q8NGV0 311 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 NAT6Q93015 286 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 WNT5BQ9H1J7 359 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 PILRBQ9UKJ0 227 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 HSF4Q9ULV5 492 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 COLCA2A8K830 154 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 C9J4A7 227 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 OR7C1O76099 320 aaPredicted RBP12.53□□□□□ -0.4
HDAC9-208ENST00000417496 CCNOP22674 350 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 ECI1P42126 302 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 Q0VFX4 171 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 CNN3Q15417 329 aaKnown RBP12.53□□□□□ -0.4
HDAC9-208ENST00000417496 SHEQ5VZ18 495 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 PLCXD3Q63HM9 321 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 OR10D3Q8NH80 312 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 INTS12Q96CB8 462 aaKnown RBP12.53□□□□□ -0.4
HDAC9-208ENST00000417496 TP53RKQ96S44 253 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 FOXB1Q99853 325 aa12.53□□□□□ -0.4
HDAC9-208ENST00000417496 KLF2Q9Y5W3 355 aaPredicted RBP12.53□□□□□ -0.4
HDAC9-208ENST00000417496 FREM1Q5H8C1 2179 aa12.52□□□□□ -0.4
HDAC9-208ENST00000417496 ZDBF2Q9HCK1 2354 aa12.52□□□□□ -0.4
HDAC9-208ENST00000417496 OR6C6A6NF89 314 aa12.52□□□□□ -0.4
HDAC9-208ENST00000417496 ZNF98A6NK75 572 aa12.52□□□□□ -0.4
HDAC9-208ENST00000417496 C3orf80F5H4A9 247 aa12.52□□□□□ -0.4
HDAC9-208ENST00000417496 SLC33A1O00400 549 aaPredicted RBP12.52□□□□□ -0.4
HDAC9-208ENST00000417496 TSPAN15O95858 294 aa12.52□□□□□ -0.4
HDAC9-208ENST00000417496 AADACP22760 399 aa12.52□□□□□ -0.4
HDAC9-208ENST00000417496 OTX2P32243 289 aa12.52□□□□□ -0.4
HDAC9-208ENST00000417496 DVL1P1P54792 670 aaPredicted RBP12.52□□□□□ -0.4
HDAC9-208ENST00000417496 DAZAP2Q15038 168 aaPredicted RBP12.52□□□□□ -0.4
HDAC9-208ENST00000417496 SUMF1Q8NBK3 374 aa12.52□□□□□ -0.4
HDAC9-208ENST00000417496 M1APQ8TC57 530 aa12.52□□□□□ -0.4
HDAC9-208ENST00000417496 ISOC2Q96AB3 205 aa12.52□□□□□ -0.4
HDAC9-208ENST00000417496 MSI2Q96DH6 328 aaKnown RBP12.52□□□□□ -0.4
HDAC9-208ENST00000417496 HS3ST6Q96QI5 342 aa12.52□□□□□ -0.4
HDAC9-208ENST00000417496 ZNF442Q9H7R0 627 aa12.52□□□□□ -0.4
HDAC9-208ENST00000417496 CACFD1Q9UGQ2 172 aa12.52□□□□□ -0.4
HDAC9-208ENST00000417496 HSPB6O14558 160 aa12.52□□□□□ -0.41
HDAC9-208ENST00000417496 TERTO14746 1132 aaKnown RBP12.52□□□□□ -0.41
HDAC9-208ENST00000417496 GAPDHP04406 335 aaKnown RBP12.52□□□□□ -0.41
HDAC9-208ENST00000417496 CST2P09228 141 aa12.52□□□□□ -0.41
HDAC9-208ENST00000417496 DTYMKP23919 212 aa12.52□□□□□ -0.41
HDAC9-208ENST00000417496 AVPI1Q5T686 147 aa12.52□□□□□ -0.41
HDAC9-208ENST00000417496 FBXW12Q6X9E4 464 aa12.52□□□□□ -0.41
HDAC9-208ENST00000417496 SLC25A26Q70HW3 274 aa12.52□□□□□ -0.41
HDAC9-208ENST00000417496 UBAC2Q8NBM4 344 aa12.52□□□□□ -0.41
HDAC9-208ENST00000417496 C14orf79Q96F83 325 aa12.52□□□□□ -0.41
HDAC9-208ENST00000417496 IP6K3Q96PC2 410 aa12.52□□□□□ -0.41
HDAC9-208ENST00000417496 OR2H1Q9GZK4 316 aa12.52□□□□□ -0.41
HDAC9-208ENST00000417496 RPS10P5Q9NQ39 176 aa12.52□□□□□ -0.41
HDAC9-208ENST00000417496 DEPPQ9NTK1 212 aa12.52□□□□□ -0.41
HDAC9-208ENST00000417496 CCDC163A0A0D9SF12 145 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 E5RGE8 158 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 EDN3P14138 238 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 TCN2P20062 427 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 LIAT1Q6ZQX7 453 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 LHFPL2Q6ZUX7 228 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 SLC35G3Q8N808 338 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 CPEB3Q8NE35 698 aaKnown RBP12.51□□□□□ -0.41
HDAC9-208ENST00000417496 GALNT14Q96FL9 552 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 C18orf12Q96KH6 178 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 C12orf57Q99622 126 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 EIF5A2Q9GZV4 153 aaKnown RBP12.51□□□□□ -0.41
HDAC9-208ENST00000417496 BCO1Q9HAY6 547 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 CRIM1Q9NZV1 1036 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 RCL1Q9Y2P8 373 aaKnown RBP12.51□□□□□ -0.41
HDAC9-208ENST00000417496 NSG2Q9Y328 171 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 TIMM10BQ9Y5J6 103 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 NCKAP5O14513 1909 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 ZNF407Q9C0G0 2248 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 hCG_38984A0A1B0GV85 526 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 P04436 131 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 TMEM42Q69YG0 159 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 ZNF611Q8N823 705 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 HLA-CQ95604 372 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 SF3B5Q9BWJ5 86 aaKnown RBP12.51□□□□□ -0.41
HDAC9-208ENST00000417496 PLEKHA2Q9HB19 425 aa12.51□□□□□ -0.41
HDAC9-208ENST00000417496 FAM212BQ9NTI7 297 aaPredicted RBP12.51□□□□□ -0.41
HDAC9-208ENST00000417496 A0A096LPE4 126 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 A0A1W2PPZ6 126 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 PINLYPA6NC86 204 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 PRH1P02810 166 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 SNRNP70P08621 437 aaKnown RBP12.5□□□□□ -0.41
HDAC9-208ENST00000417496 OMGP23515 440 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 FOLR3P41439 243 aa12.5□□□□□ -0.41
HDAC9-208ENST00000417496 HOXA1P49639 335 aaPredicted RBP12.5□□□□□ -0.41
HDAC9-208ENST00000417496 PMS2CLQ68D20 193 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms